Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4025 and Ac3H11_4026 are separated by 493 nucleotides Ac3H11_4026 and Ac3H11_4027 are separated by 39 nucleotides
Ac3H11_4025 - Probable transmembrane protein, at 267,457 to 268,506
_4025
Ac3H11_4026 - Tryptophan synthase alpha chain (EC 4.2.1.20), at 269,000 to 269,116
_4026
Ac3H11_4027 - Ribosomal protein L11 methyltransferase (EC 2.1.1.-), at 269,156 to 270,061
_4027
Position (kb) 268
269
270 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 268.099 kb on + strand, within Ac3H11_4025 at 268.100 kb on - strand, within Ac3H11_4025 at 268.100 kb on - strand, within Ac3H11_4025 at 268.100 kb on - strand, within Ac3H11_4025 at 268.392 kb on - strand, within Ac3H11_4025 at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.635 kb on + strand at 268.636 kb on - strand at 268.636 kb on - strand at 268.636 kb on - strand at 268.636 kb on - strand at 268.636 kb on - strand at 268.636 kb on - strand at 268.661 kb on - strand at 268.765 kb on + strand at 268.765 kb on + strand at 268.766 kb on - strand at 268.766 kb on - strand at 268.766 kb on - strand at 268.809 kb on + strand at 268.809 kb on + strand at 268.809 kb on + strand at 268.809 kb on + strand at 268.810 kb on - strand at 268.810 kb on - strand at 268.810 kb on - strand at 268.810 kb on - strand at 268.921 kb on + strand at 268.921 kb on + strand at 268.921 kb on + strand at 268.922 kb on - strand at 268.922 kb on - strand at 268.922 kb on - strand at 268.922 kb on - strand at 269.114 kb on + strand at 269.115 kb on - strand at 269.115 kb on - strand at 269.115 kb on - strand at 269.175 kb on + strand at 269.177 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.226 kb on + strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.227 kb on - strand at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.276 kb on + strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.277 kb on - strand, within Ac3H11_4027 at 269.365 kb on - strand, within Ac3H11_4027 at 269.365 kb on - strand, within Ac3H11_4027 at 269.365 kb on - strand, within Ac3H11_4027 at 269.529 kb on + strand, within Ac3H11_4027 at 269.529 kb on + strand, within Ac3H11_4027 at 269.529 kb on + strand, within Ac3H11_4027 at 269.529 kb on + strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 269.530 kb on - strand, within Ac3H11_4027 at 270.025 kb on + strand at 270.061 kb on + strand at 270.061 kb on + strand at 270.061 kb on + strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand at 270.062 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 268,099 + Ac3H11_4025 0.61 +0.7 268,100 - Ac3H11_4025 0.61 +2.0 268,100 - Ac3H11_4025 0.61 +1.7 268,100 - Ac3H11_4025 0.61 -1.3 268,392 - Ac3H11_4025 0.89 -1.8 268,635 + +1.2 268,635 + +1.4 268,635 + +1.7 268,635 + +1.1 268,635 + +2.5 268,635 + +0.0 268,635 + +1.1 268,635 + +1.5 268,635 + +0.7 268,635 + +1.5 268,636 - +0.4 268,636 - +1.0 268,636 - +0.1 268,636 - +1.9 268,636 - +1.3 268,636 - +3.1 268,661 - +1.6 268,765 + -1.8 268,765 + -0.8 268,766 - +0.7 268,766 - +0.2 268,766 - +0.4 268,809 + +1.9 268,809 + +0.5 268,809 + -0.4 268,809 + +0.0 268,810 - -0.5 268,810 - -0.5 268,810 - +1.6 268,810 - -1.5 268,921 + -0.9 268,921 + -0.1 268,921 + -0.2 268,922 - +2.2 268,922 - +0.1 268,922 - -0.0 268,922 - +0.9 269,114 + +1.1 269,115 - -0.3 269,115 - -2.1 269,115 - -2.1 269,175 + +2.1 269,177 + +1.2 269,226 + +0.7 269,226 + +3.2 269,226 + +3.6 269,226 + +1.9 269,226 + +0.6 269,226 + +1.9 269,226 + +2.1 269,226 + -0.0 269,226 + +3.7 269,226 + +1.7 269,226 + +3.1 269,226 + +1.4 269,227 - +0.6 269,227 - -0.1 269,227 - +1.8 269,227 - +1.5 269,227 - +0.9 269,227 - +0.3 269,227 - +2.6 269,227 - +4.2 269,227 - +0.5 269,227 - +2.1 269,227 - +1.5 269,276 + Ac3H11_4027 0.13 +3.2 269,276 + Ac3H11_4027 0.13 -1.8 269,276 + Ac3H11_4027 0.13 +1.6 269,276 + Ac3H11_4027 0.13 -0.1 269,276 + Ac3H11_4027 0.13 +0.7 269,276 + Ac3H11_4027 0.13 +2.8 269,276 + Ac3H11_4027 0.13 +2.0 269,276 + Ac3H11_4027 0.13 +0.5 269,276 + Ac3H11_4027 0.13 +2.3 269,276 + Ac3H11_4027 0.13 +1.2 269,277 - Ac3H11_4027 0.13 -0.3 269,277 - Ac3H11_4027 0.13 +1.9 269,277 - Ac3H11_4027 0.13 +3.6 269,277 - Ac3H11_4027 0.13 +0.6 269,277 - Ac3H11_4027 0.13 +2.3 269,277 - Ac3H11_4027 0.13 +0.9 269,277 - Ac3H11_4027 0.13 +2.2 269,277 - Ac3H11_4027 0.13 +2.1 269,277 - Ac3H11_4027 0.13 +0.1 269,365 - Ac3H11_4027 0.23 +0.7 269,365 - Ac3H11_4027 0.23 +0.3 269,365 - Ac3H11_4027 0.23 -1.1 269,529 + Ac3H11_4027 0.41 +2.2 269,529 + Ac3H11_4027 0.41 +3.0 269,529 + Ac3H11_4027 0.41 +1.7 269,529 + Ac3H11_4027 0.41 +0.9 269,530 - Ac3H11_4027 0.41 +1.8 269,530 - Ac3H11_4027 0.41 -0.5 269,530 - Ac3H11_4027 0.41 +0.3 269,530 - Ac3H11_4027 0.41 +0.7 269,530 - Ac3H11_4027 0.41 +2.9 269,530 - Ac3H11_4027 0.41 -0.1 270,025 + +1.5 270,061 + +2.2 270,061 + -1.6 270,061 + +3.4 270,062 - -0.1 270,062 - +1.2 270,062 - +1.2 270,062 - +0.1 270,062 - +1.8 270,062 - +1.5 270,062 - -0.6 270,062 - +3.3
Or see this region's nucleotide sequence