Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3833 and Ac3H11_3834 overlap by 13 nucleotides Ac3H11_3834 and Ac3H11_3835 are separated by 59 nucleotides Ac3H11_3835 and Ac3H11_3836 are separated by 61 nucleotides
Ac3H11_3833 - probable membrane protein YPO2051, at 49,975 to 50,367
_3833
Ac3H11_3834 - hydrolase, alpha/beta fold family, at 50,355 to 51,245
_3834
Ac3H11_3835 - Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase, at 51,305 to 51,664
_3835
Ac3H11_3836 - Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38), at 51,726 to 53,558
_3836
Position (kb)
51
52 Strain fitness (log2 ratio)
-2
-1
0
1 at 50.482 kb on - strand, within Ac3H11_3834 at 50.598 kb on + strand, within Ac3H11_3834 at 50.791 kb on - strand, within Ac3H11_3834 at 50.935 kb on + strand, within Ac3H11_3834 at 50.935 kb on + strand, within Ac3H11_3834 at 50.935 kb on + strand, within Ac3H11_3834 at 50.935 kb on + strand, within Ac3H11_3834 at 50.994 kb on + strand, within Ac3H11_3834 at 50.994 kb on + strand, within Ac3H11_3834 at 50.995 kb on - strand, within Ac3H11_3834 at 50.995 kb on - strand, within Ac3H11_3834 at 50.995 kb on - strand, within Ac3H11_3834 at 51.115 kb on - strand, within Ac3H11_3834 at 51.115 kb on - strand, within Ac3H11_3834 at 51.272 kb on + strand at 51.273 kb on - strand at 51.326 kb on + strand at 51.327 kb on - strand at 51.327 kb on - strand at 51.644 kb on + strand at 51.644 kb on + strand at 51.645 kb on - strand at 51.645 kb on - strand at 51.645 kb on - strand at 51.673 kb on + strand at 52.013 kb on - strand, within Ac3H11_3836 at 52.037 kb on - strand, within Ac3H11_3836 at 52.570 kb on + strand, within Ac3H11_3836
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 50,482 - Ac3H11_3834 0.14 -0.0 50,598 + Ac3H11_3834 0.27 -2.1 50,791 - Ac3H11_3834 0.49 +0.0 50,935 + Ac3H11_3834 0.65 +0.6 50,935 + Ac3H11_3834 0.65 +1.5 50,935 + Ac3H11_3834 0.65 +1.1 50,935 + Ac3H11_3834 0.65 -1.0 50,994 + Ac3H11_3834 0.72 -0.4 50,994 + Ac3H11_3834 0.72 -0.9 50,995 - Ac3H11_3834 0.72 +0.4 50,995 - Ac3H11_3834 0.72 -1.1 50,995 - Ac3H11_3834 0.72 +0.5 51,115 - Ac3H11_3834 0.85 +0.2 51,115 - Ac3H11_3834 0.85 -0.7 51,272 + +0.3 51,273 - -1.3 51,326 + +0.0 51,327 - -1.2 51,327 - -0.3 51,644 + +1.6 51,644 + -0.4 51,645 - +1.5 51,645 - -0.2 51,645 - -0.8 51,673 + -1.0 52,013 - Ac3H11_3836 0.16 +0.5 52,037 - Ac3H11_3836 0.17 -1.0 52,570 + Ac3H11_3836 0.46 +0.4
Or see this region's nucleotide sequence