Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3723 and Ac3H11_3724 are separated by 102 nucleotides Ac3H11_3724 and Ac3H11_3725 overlap by 4 nucleotides
Ac3H11_3723 - FAD/FMN-containing dehydrogenase, at 82,919 to 84,307
_3723
Ac3H11_3724 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 84,410 to 85,330
_3724
Ac3H11_3725 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 85,327 to 86,169
_3725
Position (kb) 84
85
86 Strain fitness (log2 ratio) -1
0
1 at 83.410 kb on - strand, within Ac3H11_3723 at 83.529 kb on + strand, within Ac3H11_3723 at 83.529 kb on + strand, within Ac3H11_3723 at 83.530 kb on - strand, within Ac3H11_3723 at 83.709 kb on + strand, within Ac3H11_3723 at 84.057 kb on + strand, within Ac3H11_3723 at 84.057 kb on + strand, within Ac3H11_3723 at 84.058 kb on - strand, within Ac3H11_3723 at 84.058 kb on - strand, within Ac3H11_3723 at 84.058 kb on - strand, within Ac3H11_3723 at 84.312 kb on + strand at 84.313 kb on - strand at 84.453 kb on - strand at 84.453 kb on - strand at 84.669 kb on + strand, within Ac3H11_3724 at 84.669 kb on + strand, within Ac3H11_3724 at 84.670 kb on - strand, within Ac3H11_3724 at 84.738 kb on + strand, within Ac3H11_3724 at 84.738 kb on + strand, within Ac3H11_3724 at 85.092 kb on + strand, within Ac3H11_3724 at 85.178 kb on + strand, within Ac3H11_3724 at 86.072 kb on + strand, within Ac3H11_3725
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 83,410 - Ac3H11_3723 0.35 +1.6 83,529 + Ac3H11_3723 0.44 -0.5 83,529 + Ac3H11_3723 0.44 -0.6 83,530 - Ac3H11_3723 0.44 +1.4 83,709 + Ac3H11_3723 0.57 -0.2 84,057 + Ac3H11_3723 0.82 -1.2 84,057 + Ac3H11_3723 0.82 +1.0 84,058 - Ac3H11_3723 0.82 +0.6 84,058 - Ac3H11_3723 0.82 -0.2 84,058 - Ac3H11_3723 0.82 -1.2 84,312 + -0.4 84,313 - -0.6 84,453 - +0.5 84,453 - -1.0 84,669 + Ac3H11_3724 0.28 -0.6 84,669 + Ac3H11_3724 0.28 +0.1 84,670 - Ac3H11_3724 0.28 -1.3 84,738 + Ac3H11_3724 0.36 -0.4 84,738 + Ac3H11_3724 0.36 -1.1 85,092 + Ac3H11_3724 0.74 -0.9 85,178 + Ac3H11_3724 0.83 -0.8 86,072 + Ac3H11_3725 0.88 -1.3
Or see this region's nucleotide sequence