Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3570 and Ac3H11_3571 are separated by 63 nucleotides Ac3H11_3571 and Ac3H11_3572 overlap by 4 nucleotides Ac3H11_3572 and Ac3H11_3573 overlap by 4 nucleotides Ac3H11_3573 and Ac3H11_3574 are separated by 9 nucleotides
Ac3H11_3570 - Periplasmic molybdate-binding domain, at 125,271 to 126,395
_3570
Ac3H11_3571 - ABC-type tungstate transport system, permease protein, at 126,459 to 127,196
_3571
Ac3H11_3572 - ABC-type tungstate transport system, ATP-binding protein, at 127,193 to 127,921
_3572
Ac3H11_3573 - ABC-type tungstate transport system, periplasmic binding protein, at 127,918 to 128,757
_3573
Ac3H11_3574 - Molybdenum-binding periplasmic protein, at 128,767 to 129,591
_3574
Position (kb) 127
128 Strain fitness (log2 ratio) -2
-1
0
1
2 at 126.256 kb on + strand, within Ac3H11_3570 at 126.257 kb on - strand, within Ac3H11_3570 at 126.257 kb on - strand, within Ac3H11_3570 at 126.373 kb on + strand at 126.373 kb on + strand at 126.373 kb on + strand at 126.373 kb on + strand at 126.374 kb on - strand at 126.405 kb on + strand at 126.405 kb on + strand at 126.430 kb on + strand at 126.464 kb on + strand at 126.464 kb on + strand at 126.464 kb on + strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.702 kb on + strand, within Ac3H11_3571 at 126.702 kb on + strand, within Ac3H11_3571 at 126.703 kb on - strand, within Ac3H11_3571 at 127.817 kb on + strand, within Ac3H11_3572 at 128.254 kb on + strand, within Ac3H11_3573 at 128.254 kb on + strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 126,256 + Ac3H11_3570 0.88 +0.9 126,257 - Ac3H11_3570 0.88 +0.1 126,257 - Ac3H11_3570 0.88 +0.6 126,373 + -0.4 126,373 + -0.3 126,373 + -0.8 126,373 + +2.0 126,374 - +0.2 126,405 + +0.0 126,405 + +0.4 126,430 + -0.2 126,464 + -1.1 126,464 + +1.0 126,464 + +0.3 126,465 - -1.8 126,465 - -0.4 126,465 - -0.3 126,465 - -0.5 126,465 - -0.5 126,465 - +0.3 126,702 + Ac3H11_3571 0.33 -0.3 126,702 + Ac3H11_3571 0.33 +0.8 126,703 - Ac3H11_3571 0.33 -0.7 127,817 + Ac3H11_3572 0.86 +0.6 128,254 + Ac3H11_3573 0.40 -1.4 128,254 + Ac3H11_3573 0.40 -1.4 128,255 - Ac3H11_3573 0.40 -0.6 128,255 - Ac3H11_3573 0.40 -1.0 128,255 - Ac3H11_3573 0.40 +0.1 128,506 + Ac3H11_3573 0.70 -0.6 128,506 + Ac3H11_3573 0.70 -1.5
Or see this region's nucleotide sequence