Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3279 and Ac3H11_3280 are separated by 123 nucleotides Ac3H11_3280 and Ac3H11_3281 are separated by 51 nucleotides
Ac3H11_3279 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 11,086 to 12,066
_3279
Ac3H11_3280 - Gfa-like protein, at 12,190 to 12,594
_3280
Ac3H11_3281 - UDP-galactose-lipid carrier transferase (EC 2.-.-.-), at 12,646 to 13,491
_3281
Position (kb) 12
13 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 12.046 kb on + strand at 12.271 kb on + strand, within Ac3H11_3280 at 12.271 kb on + strand, within Ac3H11_3280 at 12.272 kb on - strand, within Ac3H11_3280 at 12.272 kb on - strand, within Ac3H11_3280 at 12.272 kb on - strand, within Ac3H11_3280 at 12.373 kb on + strand, within Ac3H11_3280 at 12.373 kb on + strand, within Ac3H11_3280 at 12.373 kb on + strand, within Ac3H11_3280 at 12.374 kb on - strand, within Ac3H11_3280 at 12.374 kb on - strand, within Ac3H11_3280 at 12.374 kb on - strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.403 kb on + strand, within Ac3H11_3280 at 12.404 kb on - strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.469 kb on + strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.470 kb on - strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.482 kb on + strand, within Ac3H11_3280 at 12.483 kb on - strand, within Ac3H11_3280 at 12.483 kb on - strand, within Ac3H11_3280 at 12.483 kb on - strand, within Ac3H11_3280 at 12.586 kb on + strand at 12.586 kb on + strand at 12.587 kb on - strand at 12.587 kb on - strand at 12.609 kb on + strand at 12.838 kb on + strand, within Ac3H11_3281 at 12.838 kb on + strand, within Ac3H11_3281 at 12.838 kb on + strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.853 kb on + strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.886 kb on - strand at 12.886 kb on - strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.061 kb on - strand, within Ac3H11_3281 at 13.061 kb on - strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.316 kb on - strand, within Ac3H11_3281 at 13.316 kb on - strand, within Ac3H11_3281 at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.586 kb on + strand at 13.586 kb on + strand at 13.586 kb on + strand at 13.587 kb on - strand at 13.587 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 12,046 + +1.0 12,271 + Ac3H11_3280 0.20 +0.9 12,271 + Ac3H11_3280 0.20 -0.3 12,272 - Ac3H11_3280 0.20 +0.4 12,272 - Ac3H11_3280 0.20 -1.4 12,272 - Ac3H11_3280 0.20 +1.7 12,373 + Ac3H11_3280 0.45 -0.2 12,373 + Ac3H11_3280 0.45 +0.3 12,373 + Ac3H11_3280 0.45 +3.2 12,374 - Ac3H11_3280 0.45 +0.2 12,374 - Ac3H11_3280 0.45 -0.8 12,374 - Ac3H11_3280 0.45 -0.1 12,403 + Ac3H11_3280 0.53 -0.1 12,403 + Ac3H11_3280 0.53 -0.3 12,403 + Ac3H11_3280 0.53 +0.6 12,403 + Ac3H11_3280 0.53 +0.4 12,403 + Ac3H11_3280 0.53 -3.6 12,403 + Ac3H11_3280 0.53 -0.1 12,404 - Ac3H11_3280 0.53 -0.2 12,469 + Ac3H11_3280 0.69 +1.0 12,469 + Ac3H11_3280 0.69 +0.6 12,469 + Ac3H11_3280 0.69 +0.4 12,469 + Ac3H11_3280 0.69 -0.9 12,469 + Ac3H11_3280 0.69 -1.8 12,469 + Ac3H11_3280 0.69 -0.4 12,469 + Ac3H11_3280 0.69 +1.2 12,469 + Ac3H11_3280 0.69 +1.0 12,469 + Ac3H11_3280 0.69 -1.6 12,469 + Ac3H11_3280 0.69 -1.8 12,469 + Ac3H11_3280 0.69 +0.4 12,470 - Ac3H11_3280 0.69 +0.8 12,470 - Ac3H11_3280 0.69 +1.3 12,470 - Ac3H11_3280 0.69 -0.4 12,470 - Ac3H11_3280 0.69 +1.1 12,470 - Ac3H11_3280 0.69 +2.7 12,470 - Ac3H11_3280 0.69 +0.5 12,470 - Ac3H11_3280 0.69 -0.6 12,470 - Ac3H11_3280 0.69 -0.8 12,470 - Ac3H11_3280 0.69 -0.9 12,470 - Ac3H11_3280 0.69 -2.0 12,470 - Ac3H11_3280 0.69 +0.3 12,470 - Ac3H11_3280 0.69 +1.3 12,470 - Ac3H11_3280 0.69 -0.8 12,470 - Ac3H11_3280 0.69 -0.8 12,470 - Ac3H11_3280 0.69 -1.2 12,482 + Ac3H11_3280 0.72 +0.2 12,482 + Ac3H11_3280 0.72 +0.7 12,482 + Ac3H11_3280 0.72 -0.4 12,482 + Ac3H11_3280 0.72 -1.7 12,482 + Ac3H11_3280 0.72 +0.2 12,482 + Ac3H11_3280 0.72 -0.3 12,482 + Ac3H11_3280 0.72 -0.9 12,482 + Ac3H11_3280 0.72 +0.2 12,482 + Ac3H11_3280 0.72 -0.8 12,483 - Ac3H11_3280 0.72 +0.4 12,483 - Ac3H11_3280 0.72 +0.7 12,483 - Ac3H11_3280 0.72 -0.7 12,586 + -1.0 12,586 + +0.3 12,587 - +1.2 12,587 - -2.1 12,609 + +0.8 12,838 + Ac3H11_3281 0.23 +0.6 12,838 + Ac3H11_3281 0.23 +1.0 12,838 + Ac3H11_3281 0.23 +0.1 12,839 - Ac3H11_3281 0.23 +0.1 12,839 - Ac3H11_3281 0.23 +0.1 12,839 - Ac3H11_3281 0.23 +0.4 12,839 - Ac3H11_3281 0.23 -0.5 12,839 - Ac3H11_3281 0.23 -1.9 12,853 + Ac3H11_3281 0.24 +0.6 12,854 - Ac3H11_3281 0.25 +0.8 12,854 - Ac3H11_3281 0.25 -2.6 12,854 - Ac3H11_3281 0.25 +0.7 12,854 - Ac3H11_3281 0.25 -0.1 12,854 - Ac3H11_3281 0.25 -0.2 12,885 + Ac3H11_3281 0.28 -0.2 12,885 + Ac3H11_3281 0.28 +1.0 12,885 + Ac3H11_3281 0.28 +0.8 12,886 - +1.8 12,886 - Ac3H11_3281 0.28 -1.9 12,994 + Ac3H11_3281 0.41 +0.8 12,994 + Ac3H11_3281 0.41 +3.5 12,994 + Ac3H11_3281 0.41 -0.9 12,994 + Ac3H11_3281 0.41 +0.6 12,994 + Ac3H11_3281 0.41 -0.9 12,995 - Ac3H11_3281 0.41 +0.5 12,995 - Ac3H11_3281 0.41 +0.5 12,995 - Ac3H11_3281 0.41 -0.4 12,995 - Ac3H11_3281 0.41 -0.3 13,060 + Ac3H11_3281 0.49 -0.5 13,060 + Ac3H11_3281 0.49 -0.9 13,060 + Ac3H11_3281 0.49 +0.5 13,060 + Ac3H11_3281 0.49 -0.1 13,060 + Ac3H11_3281 0.49 +1.8 13,060 + Ac3H11_3281 0.49 +2.8 13,060 + Ac3H11_3281 0.49 +0.2 13,060 + Ac3H11_3281 0.49 -0.3 13,060 + Ac3H11_3281 0.49 +0.2 13,060 + Ac3H11_3281 0.49 -0.6 13,061 - Ac3H11_3281 0.49 +0.0 13,061 - Ac3H11_3281 0.49 -0.1 13,315 + Ac3H11_3281 0.79 -0.8 13,315 + Ac3H11_3281 0.79 +0.3 13,315 + Ac3H11_3281 0.79 +0.5 13,315 + Ac3H11_3281 0.79 +0.8 13,316 - Ac3H11_3281 0.79 -0.3 13,316 - Ac3H11_3281 0.79 +0.4 13,489 + +0.2 13,489 + -0.6 13,489 + -1.3 13,489 + -0.9 13,489 + -0.3 13,490 - -0.9 13,490 - +1.2 13,490 - -2.3 13,490 - +0.5 13,490 - -0.2 13,586 + -0.2 13,586 + +1.2 13,586 + +0.1 13,587 - -1.0 13,587 - -0.7
Or see this region's nucleotide sequence