Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3195 and Ac3H11_3196 are separated by 302 nucleotides Ac3H11_3196 and Ac3H11_3197 are separated by 128 nucleotides
Ac3H11_3195 - FIG002343: hypothetical protein, at 97,092 to 98,126
_3195
Ac3H11_3196 - FIG001454: Transglutaminase-like enzymes, putative cysteine proteases, at 98,429 to 100,477
_3196
Ac3H11_3197 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 100,606 to 101,565
_3197
Position (kb) 98
99
100
101 Strain fitness (log2 ratio) -2
-1
0
1
2 at 98.037 kb on + strand at 98.037 kb on + strand at 98.038 kb on - strand at 98.124 kb on + strand at 98.124 kb on + strand at 98.125 kb on - strand at 98.125 kb on - strand at 98.128 kb on - strand at 98.362 kb on - strand at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.663 kb on + strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 98.664 kb on - strand, within Ac3H11_3196 at 99.158 kb on + strand, within Ac3H11_3196 at 99.159 kb on - strand, within Ac3H11_3196 at 99.438 kb on - strand, within Ac3H11_3196 at 99.438 kb on - strand, within Ac3H11_3196 at 99.503 kb on + strand, within Ac3H11_3196 at 99.656 kb on + strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 99.657 kb on - strand, within Ac3H11_3196 at 100.079 kb on + strand, within Ac3H11_3196 at 100.527 kb on - strand at 100.529 kb on + strand at 100.533 kb on - strand at 100.547 kb on + strand at 100.590 kb on + strand at 100.612 kb on + strand at 100.613 kb on - strand at 100.778 kb on - strand, within Ac3H11_3197 at 100.921 kb on + strand, within Ac3H11_3197 at 100.922 kb on - strand, within Ac3H11_3197 at 100.922 kb on - strand, within Ac3H11_3197 at 101.098 kb on + strand, within Ac3H11_3197 at 101.150 kb on - strand, within Ac3H11_3197 at 101.150 kb on - strand, within Ac3H11_3197 at 101.227 kb on + strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.228 kb on - strand, within Ac3H11_3197 at 101.450 kb on - strand, within Ac3H11_3197
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 98,037 + -2.5 98,037 + -0.1 98,038 - -0.6 98,124 + -0.6 98,124 + -0.0 98,125 - -0.0 98,125 - -0.9 98,128 - +1.0 98,362 - +0.1 98,663 + Ac3H11_3196 0.11 -0.9 98,663 + Ac3H11_3196 0.11 +1.2 98,663 + Ac3H11_3196 0.11 +2.2 98,663 + Ac3H11_3196 0.11 -1.5 98,664 - Ac3H11_3196 0.11 -1.0 98,664 - Ac3H11_3196 0.11 +0.1 98,664 - Ac3H11_3196 0.11 -0.9 98,664 - Ac3H11_3196 0.11 +1.2 98,664 - Ac3H11_3196 0.11 +1.3 98,664 - Ac3H11_3196 0.11 +1.5 98,664 - Ac3H11_3196 0.11 +2.2 99,158 + Ac3H11_3196 0.36 +0.6 99,159 - Ac3H11_3196 0.36 -0.9 99,438 - Ac3H11_3196 0.49 +0.5 99,438 - Ac3H11_3196 0.49 -0.0 99,503 + Ac3H11_3196 0.52 +0.3 99,656 + Ac3H11_3196 0.60 -1.8 99,657 - Ac3H11_3196 0.60 +0.4 99,657 - Ac3H11_3196 0.60 -0.7 99,657 - Ac3H11_3196 0.60 +0.5 100,079 + Ac3H11_3196 0.81 +0.6 100,527 - +2.6 100,529 + -0.9 100,533 - -0.7 100,547 + -1.4 100,590 + -0.5 100,612 + +0.8 100,613 - -0.0 100,778 - Ac3H11_3197 0.18 +2.2 100,921 + Ac3H11_3197 0.33 -1.3 100,922 - Ac3H11_3197 0.33 +1.1 100,922 - Ac3H11_3197 0.33 +0.7 101,098 + Ac3H11_3197 0.51 +1.3 101,150 - Ac3H11_3197 0.57 +0.9 101,150 - Ac3H11_3197 0.57 -0.2 101,227 + Ac3H11_3197 0.65 -0.1 101,228 - Ac3H11_3197 0.65 -0.4 101,228 - Ac3H11_3197 0.65 +0.7 101,228 - Ac3H11_3197 0.65 +0.6 101,228 - Ac3H11_3197 0.65 -0.6 101,228 - Ac3H11_3197 0.65 -2.1 101,450 - Ac3H11_3197 0.88 -1.0
Or see this region's nucleotide sequence