Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3123 and Ac3H11_3124 are separated by 95 nucleotides Ac3H11_3124 and Ac3H11_3125 overlap by 4 nucleotides Ac3H11_3125 and Ac3H11_3126 are separated by 141 nucleotides
Ac3H11_3123 - 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF), at 25,463 to 26,443
_3123
Ac3H11_3124 - hypothetical protein, at 26,539 to 26,790
_3124
Ac3H11_3125 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 26,787 to 27,029
_3125
Ac3H11_3126 - Glutamate--cysteine ligase (EC 6.3.2.2), at 27,171 to 28,697
_3126
Position (kb) 26
27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 26.653 kb on + strand, within Ac3H11_3124 at 26.653 kb on + strand, within Ac3H11_3124 at 26.653 kb on + strand, within Ac3H11_3124 at 26.749 kb on + strand, within Ac3H11_3124 at 26.750 kb on - strand, within Ac3H11_3124 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.962 kb on + strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.963 kb on - strand, within Ac3H11_3125 at 26.991 kb on + strand, within Ac3H11_3125 at 27.019 kb on + strand at 27.107 kb on + strand at 27.107 kb on + strand at 27.107 kb on + strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.108 kb on - strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.123 kb on + strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.124 kb on - strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.196 kb on + strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.197 kb on - strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.283 kb on + strand at 27.469 kb on + strand, within Ac3H11_3126 at 27.469 kb on + strand, within Ac3H11_3126 at 27.470 kb on - strand, within Ac3H11_3126 at 27.772 kb on + strand, within Ac3H11_3126 at 27.772 kb on + strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.773 kb on - strand, within Ac3H11_3126 at 27.776 kb on - strand, within Ac3H11_3126 at 27.850 kb on + strand, within Ac3H11_3126 at 27.850 kb on + strand, within Ac3H11_3126 at 27.850 kb on + strand, within Ac3H11_3126 at 27.851 kb on - strand, within Ac3H11_3126 at 27.851 kb on - strand, within Ac3H11_3126 at 27.851 kb on - strand, within Ac3H11_3126 at 27.895 kb on + strand, within Ac3H11_3126 at 27.895 kb on + strand, within Ac3H11_3126 at 27.895 kb on + strand, within Ac3H11_3126 at 27.895 kb on + strand, within Ac3H11_3126 at 27.896 kb on - strand, within Ac3H11_3126 at 27.896 kb on - strand, within Ac3H11_3126 at 27.932 kb on - strand, within Ac3H11_3126 at 27.994 kb on + strand, within Ac3H11_3126 at 27.994 kb on + strand, within Ac3H11_3126 at 27.995 kb on - strand, within Ac3H11_3126 at 27.995 kb on - strand, within Ac3H11_3126 at 27.995 kb on - strand, within Ac3H11_3126 at 27.995 kb on - strand, within Ac3H11_3126 at 27.995 kb on - strand, within Ac3H11_3126
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 26,653 + Ac3H11_3124 0.45 -0.6 26,653 + Ac3H11_3124 0.45 -1.7 26,653 + Ac3H11_3124 0.45 +0.1 26,749 + Ac3H11_3124 0.83 -0.7 26,750 - Ac3H11_3124 0.84 -0.8 26,962 + Ac3H11_3125 0.72 -1.4 26,962 + Ac3H11_3125 0.72 +0.6 26,962 + Ac3H11_3125 0.72 +0.1 26,962 + Ac3H11_3125 0.72 -0.2 26,962 + Ac3H11_3125 0.72 +0.1 26,963 - Ac3H11_3125 0.72 -1.2 26,963 - Ac3H11_3125 0.72 +2.2 26,963 - Ac3H11_3125 0.72 -1.3 26,963 - Ac3H11_3125 0.72 +0.3 26,963 - Ac3H11_3125 0.72 -1.1 26,991 + Ac3H11_3125 0.84 +0.6 27,019 + -1.2 27,107 + -3.0 27,107 + -1.0 27,107 + +0.6 27,108 - +1.7 27,108 - +1.6 27,108 - +0.6 27,108 - -1.5 27,123 + -1.5 27,123 + +0.9 27,123 + -0.4 27,123 + +1.5 27,123 + -0.0 27,123 + -0.6 27,123 + -0.1 27,124 - -0.5 27,124 - +0.2 27,124 - -2.0 27,124 - -1.9 27,124 - -0.1 27,124 - +0.4 27,196 + +3.3 27,196 + +3.2 27,196 + +3.7 27,196 + +3.3 27,197 - +3.3 27,197 - +0.9 27,197 - +2.6 27,197 - +5.0 27,197 - +2.9 27,197 - +3.2 27,197 - +4.2 27,197 - +2.7 27,197 - +3.2 27,197 - +3.0 27,197 - +3.4 27,197 - +2.7 27,197 - +4.5 27,197 - +4.2 27,283 + +5.0 27,283 + +5.8 27,283 + +4.8 27,283 + +3.4 27,469 + Ac3H11_3126 0.20 +5.0 27,469 + Ac3H11_3126 0.20 +6.8 27,470 - Ac3H11_3126 0.20 +5.2 27,772 + Ac3H11_3126 0.39 +6.6 27,772 + Ac3H11_3126 0.39 +5.7 27,773 - Ac3H11_3126 0.39 +6.3 27,773 - Ac3H11_3126 0.39 +6.1 27,773 - Ac3H11_3126 0.39 +4.7 27,773 - Ac3H11_3126 0.39 +6.2 27,773 - Ac3H11_3126 0.39 +3.7 27,773 - Ac3H11_3126 0.39 +3.6 27,776 - Ac3H11_3126 0.40 +6.0 27,850 + Ac3H11_3126 0.44 +3.7 27,850 + Ac3H11_3126 0.44 +5.4 27,850 + Ac3H11_3126 0.44 +5.1 27,851 - Ac3H11_3126 0.45 +4.5 27,851 - Ac3H11_3126 0.45 +4.7 27,851 - Ac3H11_3126 0.45 +6.4 27,895 + Ac3H11_3126 0.47 +5.0 27,895 + Ac3H11_3126 0.47 +5.4 27,895 + Ac3H11_3126 0.47 +3.3 27,895 + Ac3H11_3126 0.47 +7.2 27,896 - Ac3H11_3126 0.47 +5.2 27,896 - Ac3H11_3126 0.47 +1.4 27,932 - Ac3H11_3126 0.50 +5.5 27,994 + Ac3H11_3126 0.54 +5.7 27,994 + Ac3H11_3126 0.54 +6.0 27,995 - Ac3H11_3126 0.54 +4.1 27,995 - Ac3H11_3126 0.54 +5.3 27,995 - Ac3H11_3126 0.54 +3.0 27,995 - Ac3H11_3126 0.54 +5.4 27,995 - Ac3H11_3126 0.54 +6.4
Or see this region's nucleotide sequence