Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2928

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
1,244,767	-		Ac3H11_2926	0.84	+1.4
1,244,767	-		Ac3H11_2926	0.84	-0.7
1,244,804	-		Ac3H11_2926	0.87	-1.1
1,244,825	+		Ac3H11_2926	0.88	+0.4
1,244,825	+		Ac3H11_2926	0.88	-0.7
1,244,825	+		Ac3H11_2926	0.88	-0.7
1,244,825	+		Ac3H11_2926	0.88	-2.3
1,244,826	-		Ac3H11_2926	0.88	-0.6
1,244,826	-		Ac3H11_2926	0.88	+1.2
1,244,826	-		Ac3H11_2926	0.88	-0.6
1,244,826	-		Ac3H11_2926	0.88	+0.2
1,244,826	-		Ac3H11_2926	0.88	-0.5
1,244,826	-		Ac3H11_2926	0.88	-0.6
1,244,831	+		Ac3H11_2926	0.89	-1.0
1,244,850	+		Ac3H11_2926	0.90	+0.5
1,244,851	-		Ac3H11_2926	0.90	-0.3
1,244,858	+				-0.7
1,244,859	-				-0.3
1,244,859	-				-0.2
1,244,885	+				-0.7
1,244,885	+				+0.2
1,244,886	-				-0.4
1,244,886	-				-1.6
1,244,918	+				-1.8
1,244,918	+				+0.8
1,244,918	+				+1.3
1,244,918	+				+0.9
1,244,918	+				-1.7
1,244,919	-				-1.9
1,244,919	-				+0.9
1,244,919	-				-0.2
1,245,082	+				-1.0
1,245,082	+				-0.2
1,245,082	+				+0.1
1,245,083	-				+0.9
1,245,083	-				-0.2
1,245,128	-		Ac3H11_2927	0.12	-0.5
1,245,129	+		Ac3H11_2927	0.12	+2.0
1,245,129	+		Ac3H11_2927	0.12	+1.6
1,245,129	+		Ac3H11_2927	0.12	-0.0
1,245,129	+		Ac3H11_2927	0.12	+0.5
1,245,129	+		Ac3H11_2927	0.12	-1.7
1,245,129	+		Ac3H11_2927	0.12	-1.8
1,245,129	+		Ac3H11_2927	0.12	+0.2
1,245,130	-		Ac3H11_2927	0.12	+0.2
1,245,130	-		Ac3H11_2927	0.12	+0.5
1,245,130	-		Ac3H11_2927	0.12	-0.9
1,245,130	-		Ac3H11_2927	0.12	+0.0
1,245,130	-		Ac3H11_2927	0.12	+0.7
1,245,130	-		Ac3H11_2927	0.12	-2.2
1,245,130	-		Ac3H11_2927	0.12	-1.4
1,245,189	+		Ac3H11_2927	0.25	+0.3
1,245,189	+		Ac3H11_2927	0.25	-1.1
1,245,190	-		Ac3H11_2927	0.25	+0.1
1,245,190	-		Ac3H11_2927	0.25	+1.6
1,245,208	+		Ac3H11_2927	0.29	-0.1
1,245,208	+		Ac3H11_2927	0.29	+0.7
1,245,209	-		Ac3H11_2927	0.29	+1.7
1,245,237	+		Ac3H11_2927	0.35	+0.0
1,245,238	-		Ac3H11_2927	0.35	+1.3
1,245,238	-		Ac3H11_2927	0.35	+1.1
1,245,498	+				+0.5
1,245,498	+				-0.9
1,245,498	+				-0.7
1,245,498	+				+1.2
1,245,498	+				-0.6
1,245,499	-				-0.2
1,245,499	-				-0.1
1,245,499	-				-0.4
1,245,499	-				-0.8
1,245,621	+				+0.9
1,245,621	+				+2.2
1,245,621	+				-0.4
1,245,621	+				-1.8
1,245,621	+				-0.1
1,245,621	+				+0.7
1,245,621	+				+0.0
1,245,621	+				-0.6
1,245,621	+				+1.7
1,245,622	-				+0.2
1,245,622	-				-0.1
1,245,622	-				-2.2
1,245,622	-				+0.7
1,245,623	+				+1.3
1,245,623	+				-0.1
1,245,677	-				-2.5
1,245,838	+		Ac3H11_2928	0.13	+1.1
1,245,838	+		Ac3H11_2928	0.13	+0.4
1,245,838	+		Ac3H11_2928	0.13	-1.0
1,245,838	+		Ac3H11_2928	0.13	-1.0
1,245,838	+		Ac3H11_2928	0.13	-0.6
1,245,839	-		Ac3H11_2928	0.13	+1.0
1,245,839	-		Ac3H11_2928	0.13	+1.5
1,246,004	-		Ac3H11_2928	0.26	+0.7
1,246,030	+		Ac3H11_2928	0.28	+0.8
1,246,031	-		Ac3H11_2928	0.28	-1.8
1,246,160	+		Ac3H11_2928	0.38	+3.6
1,246,160	+		Ac3H11_2928	0.38	+1.5
1,246,161	-		Ac3H11_2928	0.38	+3.2
1,246,161	-		Ac3H11_2928	0.38	+1.1
1,246,161	-		Ac3H11_2928	0.38	-0.6
1,246,279	+		Ac3H11_2928	0.47	-0.1
1,246,279	+		Ac3H11_2928	0.47	+1.7
1,246,280	-		Ac3H11_2928	0.47	-1.4
1,246,280	-		Ac3H11_2928	0.47	-2.0
1,246,280	-		Ac3H11_2928	0.47	-0.3
1,246,405	+		Ac3H11_2928	0.56	-0.4
1,246,406	-		Ac3H11_2928	0.56	+0.6
1,246,406	-		Ac3H11_2928	0.56	+1.0
1,247,010	+				-0.4
1,247,010	+				+0.6
1,247,010	+				-0.7
1,247,010	+				-0.2
1,247,010	+				+0.8
1,247,010	+				+0.3
1,247,010	+				+2.0
1,247,010	+				+1.4
1,247,010	+				+0.8
1,247,010	+				-1.4
1,247,010	+				+0.8
1,247,010	+				+0.4
1,247,011	-				-0.1
1,247,011	-				+0.3
1,247,011	-				-0.4
1,247,011	-				+0.2
1,247,011	-				-0.3
1,247,011	-				+0.2
1,247,011	-				-0.6
1,247,011	-				+0.7
1,247,016	+				-0.3
1,247,016	+				-0.2
1,247,112	+		Ac3H11_2929	0.16	-0.3
1,247,112	+		Ac3H11_2929	0.16	+0.1
1,247,113	-		Ac3H11_2929	0.16	-0.1
1,247,113	-		Ac3H11_2929	0.16	-1.7
1,247,574	+		Ac3H11_2929	0.73	+1.2
1,247,574	+		Ac3H11_2929	0.73	+0.7
1,247,575	-		Ac3H11_2929	0.73	-1.7
1,247,575	-		Ac3H11_2929	0.73	+0.0
1,247,575	-		Ac3H11_2929	0.73	-1.0
1,247,903	-				-2.4
1,247,950	+				-1.0
1,247,950	+				+0.9
1,247,951	-				-0.1