Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2704

Experiment: D-Cycloserine 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.05 mg/ml
999,854	+		Ac3H11_2703	0.76	+2.4
999,854	+		Ac3H11_2703	0.76	-1.1
999,854	+		Ac3H11_2703	0.76	+0.4
999,855	-		Ac3H11_2703	0.76	+1.6
999,994	-				-0.6
1,000,248	+				-0.5
1,000,248	+				+0.6
1,000,249	-				+0.1
1,000,257	+				+0.4
1,000,257	+				-2.1
1,000,257	+				+0.6
1,000,257	+				-0.6
1,000,257	+				-0.1
1,000,257	+				+1.6
1,000,258	-				-1.2
1,000,258	-				-0.1
1,000,258	-				-1.2
1,000,258	-				-0.3
1,000,258	-				+1.2
1,000,262	-				-0.1
1,000,415	+				+1.7
1,000,430	+				-0.7
1,000,582	+				-0.7
1,000,617	+				+0.4
1,000,672	+				-0.1
1,000,689	+				-1.4
1,000,705	+				-1.5
1,000,740	+				-0.3
1,000,740	+				-0.5
1,000,740	+				-1.9
1,001,921	+		Ac3H11_2704	0.75	+0.2
1,001,922	-		Ac3H11_2704	0.75	+0.8
1,001,978	+		Ac3H11_2704	0.79	+0.4
1,001,978	+		Ac3H11_2704	0.79	-1.2
1,002,113	+		Ac3H11_2704	0.87	-0.9
1,002,113	+		Ac3H11_2704	0.87	-1.1
1,002,113	+		Ac3H11_2704	0.87	-2.1
1,002,388	-				-2.5
1,002,388	-				-0.1
1,002,443	+				-1.2
1,002,489	-				-2.3
1,002,494	+				+0.3
1,002,566	-				+0.3
1,002,591	+				-0.1
1,002,592	-				-1.4
1,002,598	+				-0.1
1,002,805	+				-0.6
1,002,805	+				+0.1
1,002,805	+				+1.0
1,002,806	-				+0.9
1,002,806	-				-0.1
1,002,987	+		Ac3H11_2705	0.18	+0.4
1,002,987	+		Ac3H11_2705	0.18	-1.4
1,002,987	+		Ac3H11_2705	0.18	-0.8
1,002,988	-		Ac3H11_2705	0.18	+0.5