Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_266 and Ac3H11_267 are separated by 6 nucleotides Ac3H11_267 and Ac3H11_268 overlap by 4 nucleotides Ac3H11_268 and Ac3H11_269 are separated by 229 nucleotides
Ac3H11_266 - DNA internalization-related competence protein ComEC/Rec2, at 88,678 to 91,248
_266
Ac3H11_267 - hypothetical protein, at 91,255 to 91,404
_267
Ac3H11_268 - Bona fide RidA/YjgF/TdcF/RutC subgroup, at 91,401 to 91,859
_268
Ac3H11_269 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 92,089 to 93,855
_269
Position (kb) 91
92 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 90.539 kb on + strand, within Ac3H11_266 at 90.539 kb on + strand, within Ac3H11_266 at 90.539 kb on + strand, within Ac3H11_266 at 90.539 kb on + strand, within Ac3H11_266 at 90.539 kb on + strand, within Ac3H11_266 at 90.539 kb on + strand, within Ac3H11_266 at 90.540 kb on - strand, within Ac3H11_266 at 90.540 kb on - strand, within Ac3H11_266 at 90.722 kb on + strand, within Ac3H11_266 at 90.723 kb on - strand, within Ac3H11_266 at 90.896 kb on + strand, within Ac3H11_266 at 90.896 kb on + strand, within Ac3H11_266 at 90.897 kb on - strand, within Ac3H11_266 at 90.897 kb on - strand, within Ac3H11_266 at 90.930 kb on + strand, within Ac3H11_266 at 90.931 kb on - strand, within Ac3H11_266 at 91.073 kb on + strand at 91.073 kb on + strand at 91.228 kb on - strand at 91.238 kb on - strand at 91.238 kb on - strand at 91.259 kb on + strand at 91.259 kb on + strand at 91.259 kb on + strand at 91.259 kb on + strand at 91.259 kb on + strand at 91.259 kb on + strand at 91.260 kb on - strand at 91.308 kb on + strand, within Ac3H11_267 at 91.308 kb on + strand, within Ac3H11_267 at 91.309 kb on - strand, within Ac3H11_267 at 91.309 kb on - strand, within Ac3H11_267 at 91.309 kb on - strand, within Ac3H11_267 at 91.309 kb on - strand, within Ac3H11_267 at 91.309 kb on - strand, within Ac3H11_267 at 91.411 kb on - strand at 91.411 kb on - strand at 91.471 kb on - strand, within Ac3H11_268 at 91.479 kb on + strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 91.480 kb on - strand, within Ac3H11_268 at 92.090 kb on + strand at 92.090 kb on + strand at 92.090 kb on + strand at 92.306 kb on + strand, within Ac3H11_269 at 92.306 kb on + strand, within Ac3H11_269 at 92.306 kb on + strand, within Ac3H11_269 at 92.306 kb on + strand, within Ac3H11_269 at 92.306 kb on + strand, within Ac3H11_269 at 92.307 kb on - strand, within Ac3H11_269 at 92.307 kb on - strand, within Ac3H11_269
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 90,539 + Ac3H11_266 0.72 +1.7 90,539 + Ac3H11_266 0.72 +1.4 90,539 + Ac3H11_266 0.72 +4.1 90,539 + Ac3H11_266 0.72 -2.1 90,539 + Ac3H11_266 0.72 +0.9 90,539 + Ac3H11_266 0.72 +1.0 90,540 - Ac3H11_266 0.72 +0.5 90,540 - Ac3H11_266 0.72 -0.7 90,722 + Ac3H11_266 0.80 +0.4 90,723 - Ac3H11_266 0.80 +1.7 90,896 + Ac3H11_266 0.86 -0.7 90,896 + Ac3H11_266 0.86 -1.1 90,897 - Ac3H11_266 0.86 -0.9 90,897 - Ac3H11_266 0.86 +0.1 90,930 + Ac3H11_266 0.88 +0.9 90,931 - Ac3H11_266 0.88 -0.6 91,073 + -0.9 91,073 + +1.4 91,228 - -1.8 91,238 - -1.1 91,238 - +0.6 91,259 + -1.9 91,259 + -0.2 91,259 + +1.2 91,259 + -0.4 91,259 + -1.3 91,259 + +0.2 91,260 - +0.1 91,308 + Ac3H11_267 0.35 -0.3 91,308 + Ac3H11_267 0.35 -0.1 91,309 - Ac3H11_267 0.36 +1.0 91,309 - Ac3H11_267 0.36 -1.1 91,309 - Ac3H11_267 0.36 -2.3 91,309 - Ac3H11_267 0.36 +0.2 91,309 - Ac3H11_267 0.36 +2.2 91,411 - +0.8 91,411 - -1.3 91,471 - Ac3H11_268 0.15 +1.7 91,479 + Ac3H11_268 0.17 +2.2 91,480 - Ac3H11_268 0.17 -0.6 91,480 - Ac3H11_268 0.17 +0.2 91,480 - Ac3H11_268 0.17 +1.8 91,480 - Ac3H11_268 0.17 -0.0 91,480 - Ac3H11_268 0.17 -0.6 91,480 - Ac3H11_268 0.17 +1.2 92,090 + +1.2 92,090 + -1.0 92,090 + +0.4 92,306 + Ac3H11_269 0.12 -1.6 92,306 + Ac3H11_269 0.12 +1.1 92,306 + Ac3H11_269 0.12 +0.9 92,306 + Ac3H11_269 0.12 +0.6 92,306 + Ac3H11_269 0.12 -2.2 92,307 - Ac3H11_269 0.12 +1.8 92,307 - Ac3H11_269 0.12 +0.5
Or see this region's nucleotide sequence