Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2364 and Ac3H11_2365 are separated by 159 nucleotides Ac3H11_2365 and Ac3H11_2366 are separated by 8 nucleotides
Ac3H11_2364 - Ferrichrome-iron receptor, at 621,944 to 624,139
_2364
Ac3H11_2365 - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1), at 624,299 to 625,912
_2365
Ac3H11_2366 - ABC transporter, permease protein, at 625,921 to 626,877
_2366
Position (kb) 624
625
626 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 623.342 kb on + strand, within Ac3H11_2364 at 623.342 kb on + strand, within Ac3H11_2364 at 623.342 kb on + strand, within Ac3H11_2364 at 623.342 kb on + strand, within Ac3H11_2364 at 623.342 kb on + strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.343 kb on - strand, within Ac3H11_2364 at 623.453 kb on + strand, within Ac3H11_2364 at 623.453 kb on + strand, within Ac3H11_2364 at 623.453 kb on + strand, within Ac3H11_2364 at 623.453 kb on + strand, within Ac3H11_2364 at 623.453 kb on + strand, within Ac3H11_2364 at 623.454 kb on - strand, within Ac3H11_2364 at 623.454 kb on - strand, within Ac3H11_2364 at 623.605 kb on + strand, within Ac3H11_2364 at 623.605 kb on + strand, within Ac3H11_2364 at 623.605 kb on + strand, within Ac3H11_2364 at 623.605 kb on + strand, within Ac3H11_2364 at 623.606 kb on - strand, within Ac3H11_2364 at 623.606 kb on - strand, within Ac3H11_2364 at 623.606 kb on - strand, within Ac3H11_2364 at 623.838 kb on - strand, within Ac3H11_2364 at 623.838 kb on - strand, within Ac3H11_2364 at 623.838 kb on - strand, within Ac3H11_2364 at 623.868 kb on - strand, within Ac3H11_2364 at 623.899 kb on + strand, within Ac3H11_2364 at 623.900 kb on - strand, within Ac3H11_2364 at 623.900 kb on - strand, within Ac3H11_2364 at 623.969 kb on + strand at 623.969 kb on + strand at 623.969 kb on + strand at 623.969 kb on + strand at 623.969 kb on + strand at 623.970 kb on - strand at 623.970 kb on - strand at 623.970 kb on - strand at 623.970 kb on - strand at 623.993 kb on + strand at 624.059 kb on + strand at 624.059 kb on + strand at 624.059 kb on + strand at 624.059 kb on + strand at 624.059 kb on + strand at 624.060 kb on - strand at 624.060 kb on - strand at 624.071 kb on + strand at 624.072 kb on - strand at 624.072 kb on - strand at 624.489 kb on - strand, within Ac3H11_2365 at 624.836 kb on + strand, within Ac3H11_2365 at 624.836 kb on + strand, within Ac3H11_2365 at 624.837 kb on - strand, within Ac3H11_2365 at 624.837 kb on - strand, within Ac3H11_2365 at 624.939 kb on - strand, within Ac3H11_2365 at 624.939 kb on - strand, within Ac3H11_2365 at 624.975 kb on - strand, within Ac3H11_2365 at 625.040 kb on + strand, within Ac3H11_2365 at 625.041 kb on - strand, within Ac3H11_2365 at 625.598 kb on + strand, within Ac3H11_2365 at 625.599 kb on - strand, within Ac3H11_2365 at 625.599 kb on - strand, within Ac3H11_2365 at 625.811 kb on + strand at 625.812 kb on - strand at 625.877 kb on + strand at 625.878 kb on - strand at 626.065 kb on + strand, within Ac3H11_2366 at 626.066 kb on - strand, within Ac3H11_2366 at 626.066 kb on - strand, within Ac3H11_2366 at 626.520 kb on - strand, within Ac3H11_2366 at 626.549 kb on + strand, within Ac3H11_2366 at 626.648 kb on - strand, within Ac3H11_2366 at 626.648 kb on - strand, within Ac3H11_2366 at 626.648 kb on - strand, within Ac3H11_2366 at 626.648 kb on - strand, within Ac3H11_2366 at 626.804 kb on + strand at 626.804 kb on + strand at 626.805 kb on - strand at 626.805 kb on - strand at 626.805 kb on - strand at 626.805 kb on - strand at 626.822 kb on + strand at 626.822 kb on + strand at 626.822 kb on + strand at 626.822 kb on + strand at 626.822 kb on + strand at 626.823 kb on - strand at 626.857 kb on - strand at 626.867 kb on + strand at 626.867 kb on + strand at 626.867 kb on + strand at 626.868 kb on - strand at 626.868 kb on - strand at 626.868 kb on - strand at 626.884 kb on + strand at 626.885 kb on - strand at 626.885 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 623,342 + Ac3H11_2364 0.64 +2.4 623,342 + Ac3H11_2364 0.64 -1.3 623,342 + Ac3H11_2364 0.64 +2.7 623,342 + Ac3H11_2364 0.64 -0.6 623,342 + Ac3H11_2364 0.64 +0.0 623,343 - Ac3H11_2364 0.64 +0.5 623,343 - Ac3H11_2364 0.64 -0.8 623,343 - Ac3H11_2364 0.64 +0.7 623,343 - Ac3H11_2364 0.64 +0.1 623,343 - Ac3H11_2364 0.64 +0.9 623,343 - Ac3H11_2364 0.64 -1.2 623,343 - Ac3H11_2364 0.64 -0.1 623,343 - Ac3H11_2364 0.64 +1.2 623,343 - Ac3H11_2364 0.64 -3.3 623,453 + Ac3H11_2364 0.69 -0.4 623,453 + Ac3H11_2364 0.69 -0.8 623,453 + Ac3H11_2364 0.69 -2.3 623,453 + Ac3H11_2364 0.69 +1.1 623,453 + Ac3H11_2364 0.69 +0.5 623,454 - Ac3H11_2364 0.69 +6.8 623,454 - Ac3H11_2364 0.69 -0.7 623,605 + Ac3H11_2364 0.76 -1.0 623,605 + Ac3H11_2364 0.76 -0.8 623,605 + Ac3H11_2364 0.76 +1.3 623,605 + Ac3H11_2364 0.76 -1.3 623,606 - Ac3H11_2364 0.76 +0.2 623,606 - Ac3H11_2364 0.76 -0.8 623,606 - Ac3H11_2364 0.76 +0.7 623,838 - Ac3H11_2364 0.86 -0.1 623,838 - Ac3H11_2364 0.86 +0.6 623,838 - Ac3H11_2364 0.86 +0.5 623,868 - Ac3H11_2364 0.88 -0.8 623,899 + Ac3H11_2364 0.89 +0.8 623,900 - Ac3H11_2364 0.89 -0.0 623,900 - Ac3H11_2364 0.89 -1.6 623,969 + +0.8 623,969 + +1.3 623,969 + +0.1 623,969 + -0.4 623,969 + +1.2 623,970 - -1.4 623,970 - -1.2 623,970 - +1.2 623,970 - -0.0 623,993 + -0.9 624,059 + +0.8 624,059 + -1.0 624,059 + +1.6 624,059 + +0.9 624,059 + -0.3 624,060 - +1.4 624,060 - +1.5 624,071 + -2.2 624,072 - +0.6 624,072 - -0.9 624,489 - Ac3H11_2365 0.12 +0.8 624,836 + Ac3H11_2365 0.33 -0.2 624,836 + Ac3H11_2365 0.33 +0.1 624,837 - Ac3H11_2365 0.33 +1.4 624,837 - Ac3H11_2365 0.33 -0.2 624,939 - Ac3H11_2365 0.40 -1.6 624,939 - Ac3H11_2365 0.40 +1.1 624,975 - Ac3H11_2365 0.42 +2.7 625,040 + Ac3H11_2365 0.46 -1.4 625,041 - Ac3H11_2365 0.46 -0.6 625,598 + Ac3H11_2365 0.80 +0.3 625,599 - Ac3H11_2365 0.81 -0.9 625,599 - Ac3H11_2365 0.81 +0.4 625,811 + -0.8 625,812 - -1.2 625,877 + -0.0 625,878 - +0.9 626,065 + Ac3H11_2366 0.15 -1.9 626,066 - Ac3H11_2366 0.15 -0.2 626,066 - Ac3H11_2366 0.15 +1.3 626,520 - Ac3H11_2366 0.63 +0.1 626,549 + Ac3H11_2366 0.66 +0.4 626,648 - Ac3H11_2366 0.76 +0.5 626,648 - Ac3H11_2366 0.76 +0.2 626,648 - Ac3H11_2366 0.76 -0.2 626,648 - Ac3H11_2366 0.76 -1.5 626,804 + -2.7 626,804 + -0.4 626,805 - +0.2 626,805 - -1.6 626,805 - -1.4 626,805 - -0.4 626,822 + +0.2 626,822 + -0.1 626,822 + -0.5 626,822 + -0.5 626,822 + -0.9 626,823 - +1.2 626,857 - +1.4 626,867 + -0.3 626,867 + +0.6 626,867 + -0.3 626,868 - +0.6 626,868 - -0.3 626,868 - -0.8 626,884 + -1.0 626,885 - +1.4 626,885 - +0.1
Or see this region's nucleotide sequence