Experiment: MoYLS4 with Vanillin 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2751 and DvMF_2752 overlap by 4 nucleotides DvMF_2752 and DvMF_2753 overlap by 4 nucleotides DvMF_2753 and DvMF_2754 are separated by 276 nucleotides
DvMF_2751: DvMF_2751 - inner-membrane translocator (RefSeq), at 3,476,605 to 3,477,510
_2751
DvMF_2752: DvMF_2752 - inner-membrane translocator (RefSeq), at 3,477,507 to 3,478,499
_2752
DvMF_2753: DvMF_2753 - ABC transporter related (RefSeq), at 3,478,496 to 3,479,263
_2753
DvMF_2754: DvMF_2754 - ABC transporter related (RefSeq), at 3,479,540 to 3,480,256
_2754
Position (kb)
3478
3479
3480 Strain fitness (log2 ratio)
-1
0
1
2 at 3477.719 kb on + strand, within DvMF_2752 at 3477.997 kb on - strand, within DvMF_2752 at 3478.002 kb on - strand, within DvMF_2752 at 3478.009 kb on + strand, within DvMF_2752 at 3478.132 kb on - strand, within DvMF_2752 at 3478.236 kb on - strand, within DvMF_2752 at 3478.272 kb on - strand, within DvMF_2752 at 3478.351 kb on + strand, within DvMF_2752 at 3478.351 kb on + strand, within DvMF_2752 at 3478.856 kb on - strand, within DvMF_2753 at 3478.921 kb on - strand, within DvMF_2753 at 3479.065 kb on + strand, within DvMF_2753 at 3479.227 kb on + strand at 3479.313 kb on - strand at 3479.570 kb on + strand at 3479.578 kb on - strand at 3479.588 kb on + strand at 3479.596 kb on - strand at 3479.657 kb on + strand, within DvMF_2754 at 3479.696 kb on - strand, within DvMF_2754 at 3479.719 kb on + strand, within DvMF_2754 at 3480.006 kb on - strand, within DvMF_2754
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vanillin 2.5 mM remove 3,477,719 + DvMF_2752 0.21 -0.6 3,477,997 - DvMF_2752 0.49 -0.4 3,478,002 - DvMF_2752 0.50 -0.5 3,478,009 + DvMF_2752 0.51 +0.6 3,478,132 - DvMF_2752 0.63 -0.2 3,478,236 - DvMF_2752 0.73 -0.3 3,478,272 - DvMF_2752 0.77 -0.3 3,478,351 + DvMF_2752 0.85 -0.5 3,478,351 + DvMF_2752 0.85 -0.3 3,478,856 - DvMF_2753 0.47 -0.4 3,478,921 - DvMF_2753 0.55 +2.4 3,479,065 + DvMF_2753 0.74 +0.2 3,479,227 + -0.0 3,479,313 - +0.9 3,479,570 + +0.5 3,479,578 - -0.4 3,479,588 + -0.8 3,479,596 - -0.9 3,479,657 + DvMF_2754 0.16 -0.0 3,479,696 - DvMF_2754 0.22 +0.6 3,479,719 + DvMF_2754 0.25 -0.0 3,480,006 - DvMF_2754 0.65 +0.1
Or see this region's nucleotide sequence