Experiment: MoYLS4 with Vanillin 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2324 and DvMF_2325 are separated by 121 nucleotides DvMF_2325 and DvMF_2326 are separated by 288 nucleotides
DvMF_2324: DvMF_2324 - PAS/PAC sensor hybrid histidine kinase (RefSeq), at 2,926,030 to 2,929,518
_2324
DvMF_2325: DvMF_2325 - ectoine/hydroxyectoine ABC transporter solute-binding protein (RefSeq), at 2,929,640 to 2,930,539
_2325
DvMF_2326: DvMF_2326 - TPR repeat-containing protein (RefSeq), at 2,930,828 to 2,931,592
_2326
Position (kb)
2929
2930
2931 Strain fitness (log2 ratio)
-1
0
1 at 2928.800 kb on - strand, within DvMF_2324 at 2928.895 kb on - strand, within DvMF_2324 at 2928.946 kb on + strand, within DvMF_2324 at 2928.946 kb on + strand, within DvMF_2324 at 2928.954 kb on - strand, within DvMF_2324 at 2929.222 kb on + strand at 2929.230 kb on - strand at 2929.429 kb on + strand at 2929.445 kb on + strand at 2929.527 kb on - strand at 2929.645 kb on + strand at 2929.705 kb on + strand at 2929.916 kb on + strand, within DvMF_2325 at 2929.939 kb on + strand, within DvMF_2325 at 2929.947 kb on - strand, within DvMF_2325 at 2930.009 kb on - strand, within DvMF_2325 at 2930.068 kb on + strand, within DvMF_2325 at 2930.076 kb on - strand, within DvMF_2325 at 2930.284 kb on - strand, within DvMF_2325 at 2930.489 kb on - strand at 2930.612 kb on - strand at 2930.705 kb on + strand at 2930.713 kb on - strand at 2931.200 kb on + strand, within DvMF_2326 at 2931.503 kb on + strand, within DvMF_2326
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vanillin 2.5 mM remove 2,928,800 - DvMF_2324 0.79 -0.3 2,928,895 - DvMF_2324 0.82 -0.3 2,928,946 + DvMF_2324 0.84 -1.1 2,928,946 + DvMF_2324 0.84 -0.0 2,928,954 - DvMF_2324 0.84 -0.0 2,929,222 + -0.2 2,929,230 - -1.0 2,929,429 + -0.2 2,929,445 + +0.3 2,929,527 - -0.6 2,929,645 + -0.5 2,929,705 + +0.0 2,929,916 + DvMF_2325 0.31 +1.6 2,929,939 + DvMF_2325 0.33 -0.3 2,929,947 - DvMF_2325 0.34 +0.1 2,930,009 - DvMF_2325 0.41 -0.2 2,930,068 + DvMF_2325 0.48 +0.1 2,930,076 - DvMF_2325 0.48 -0.2 2,930,284 - DvMF_2325 0.72 +0.0 2,930,489 - -0.4 2,930,612 - -0.7 2,930,705 + -0.7 2,930,713 - -0.4 2,931,200 + DvMF_2326 0.49 -0.4 2,931,503 + DvMF_2326 0.88 -0.3
Or see this region's nucleotide sequence