Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3077 and DVU3079 are separated by 746 nucleotides DVU3079 and DVU3080 are separated by 261 nucleotides DVU3080 and DVU3081 are separated by 267 nucleotides
DVU3077: DVU3077 - AhpC/TSA family protein (TIGR), at 3,220,001 to 3,220,762
DVU3077
DVU3079: DVU3079 - glyoxalase family protein (TIGR), at 3,221,509 to 3,222,111
DVU3079
DVU3080: DVU3080 - transcriptional regulator, putative (TIGR), at 3,222,373 to 3,222,771
DVU3080
DVU3081: DVU3081 - membrane protein, putative (TIGR), at 3,223,039 to 3,223,941
DVU3081
Position (kb)
3221
3222
3223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3220.610 kb on + strand, within DVU3077 at 3220.680 kb on + strand, within DVU3077 at 3220.712 kb on + strand at 3220.712 kb on + strand at 3220.712 kb on + strand at 3220.712 kb on + strand at 3220.734 kb on - strand at 3220.800 kb on - strand at 3220.808 kb on + strand at 3220.854 kb on - strand at 3220.859 kb on + strand at 3220.867 kb on - strand at 3220.892 kb on + strand at 3220.905 kb on - strand at 3220.938 kb on + strand at 3221.001 kb on - strand at 3221.063 kb on - strand at 3221.152 kb on + strand at 3221.160 kb on - strand at 3221.169 kb on - strand at 3221.436 kb on + strand at 3221.444 kb on - strand at 3221.444 kb on - strand at 3221.468 kb on + strand at 3221.598 kb on + strand, within DVU3079 at 3221.620 kb on - strand, within DVU3079 at 3221.620 kb on - strand, within DVU3079 at 3221.635 kb on + strand, within DVU3079 at 3221.635 kb on + strand, within DVU3079 at 3221.690 kb on + strand, within DVU3079 at 3221.725 kb on + strand, within DVU3079 at 3221.725 kb on + strand, within DVU3079 at 3221.733 kb on - strand, within DVU3079 at 3221.733 kb on - strand, within DVU3079 at 3221.737 kb on + strand, within DVU3079 at 3221.745 kb on - strand, within DVU3079 at 3221.761 kb on - strand, within DVU3079 at 3221.818 kb on + strand, within DVU3079 at 3221.820 kb on + strand, within DVU3079 at 3221.826 kb on - strand, within DVU3079 at 3221.836 kb on + strand, within DVU3079 at 3221.856 kb on - strand, within DVU3079 at 3221.882 kb on + strand, within DVU3079 at 3221.918 kb on - strand, within DVU3079 at 3221.936 kb on - strand, within DVU3079 at 3221.981 kb on + strand, within DVU3079 at 3222.097 kb on + strand at 3222.349 kb on - strand at 3222.522 kb on + strand, within DVU3080 at 3222.873 kb on + strand at 3222.881 kb on - strand at 3222.972 kb on + strand at 3223.006 kb on - strand at 3223.023 kb on + strand at 3223.052 kb on + strand at 3223.060 kb on - strand at 3223.070 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 3,220,610 + DVU3077 0.80 +0.6 3,220,680 + DVU3077 0.89 +0.4 3,220,712 + -1.4 3,220,712 + -1.0 3,220,712 + -0.1 3,220,712 + +0.2 3,220,734 - -0.7 3,220,800 - +0.0 3,220,808 + +0.7 3,220,854 - -1.1 3,220,859 + +0.5 3,220,867 - -0.2 3,220,892 + -0.4 3,220,905 - -0.2 3,220,938 + +0.0 3,221,001 - -0.4 3,221,063 - -1.4 3,221,152 + -1.7 3,221,160 - +1.0 3,221,169 - -0.1 3,221,436 + -0.2 3,221,444 - +1.0 3,221,444 - -1.0 3,221,468 + -1.0 3,221,598 + DVU3079 0.15 -1.5 3,221,620 - DVU3079 0.18 -0.4 3,221,620 - DVU3079 0.18 -0.5 3,221,635 + DVU3079 0.21 -1.0 3,221,635 + DVU3079 0.21 -0.2 3,221,690 + DVU3079 0.30 +0.2 3,221,725 + DVU3079 0.36 +0.0 3,221,725 + DVU3079 0.36 -0.1 3,221,733 - DVU3079 0.37 -0.1 3,221,733 - DVU3079 0.37 -1.3 3,221,737 + DVU3079 0.38 -0.1 3,221,745 - DVU3079 0.39 -0.2 3,221,761 - DVU3079 0.42 -0.1 3,221,818 + DVU3079 0.51 -2.3 3,221,820 + DVU3079 0.52 -0.8 3,221,826 - DVU3079 0.53 +0.5 3,221,836 + DVU3079 0.54 -1.3 3,221,856 - DVU3079 0.58 -0.4 3,221,882 + DVU3079 0.62 -0.0 3,221,918 - DVU3079 0.68 +0.1 3,221,936 - DVU3079 0.71 +0.7 3,221,981 + DVU3079 0.78 +1.9 3,222,097 + -0.3 3,222,349 - -0.0 3,222,522 + DVU3080 0.37 -0.0 3,222,873 + -0.6 3,222,881 - +0.1 3,222,972 + -0.3 3,223,006 - -0.0 3,223,023 + -1.0 3,223,052 + -0.9 3,223,060 - +0.6 3,223,070 - -0.4
Or see this region's nucleotide sequence