Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt miaA and DVU1534 are separated by 149 nucleotides DVU1534 and DVU1535 overlap by 1 nucleotides DVU1535 and mltC are separated by 124 nucleotides
DVU1533: miaA - tRNA delta(2)-isopentenylpyrophosphate transferase (TIGR), at 1,600,856 to 1,601,785
miaA
DVU1534: DVU1534 - membrane protein, putative (TIGR), at 1,601,935 to 1,602,447
DVU1534
DVU1535: DVU1535 - membrane protein, putative (TIGR), at 1,602,447 to 1,602,968
DVU1535
DVU1536: mltC - transglycosylase, SLT family (TIGR), at 1,603,093 to 1,604,229
mltC
Position (kb)
1602
1603 Strain fitness (log2 ratio)
-2
-1
0
1 at 1601.884 kb on - strand at 1601.984 kb on + strand at 1602.225 kb on - strand, within DVU1534 at 1602.251 kb on + strand, within DVU1534 at 1602.266 kb on - strand, within DVU1534 at 1602.290 kb on + strand, within DVU1534 at 1602.290 kb on + strand, within DVU1534 at 1602.300 kb on + strand, within DVU1534 at 1602.300 kb on + strand, within DVU1534 at 1602.308 kb on - strand, within DVU1534 at 1602.342 kb on - strand, within DVU1534 at 1602.343 kb on - strand, within DVU1534 at 1602.349 kb on - strand, within DVU1534 at 1602.426 kb on + strand at 1602.499 kb on + strand at 1602.604 kb on + strand, within DVU1535 at 1602.620 kb on + strand, within DVU1535 at 1602.686 kb on - strand, within DVU1535 at 1602.698 kb on - strand, within DVU1535 at 1602.704 kb on - strand, within DVU1535 at 1602.713 kb on - strand, within DVU1535 at 1602.788 kb on + strand, within DVU1535 at 1602.807 kb on + strand, within DVU1535 at 1603.182 kb on + strand at 1603.229 kb on + strand, within mltC at 1603.351 kb on + strand, within mltC at 1603.367 kb on - strand, within mltC at 1603.414 kb on + strand, within mltC at 1603.539 kb on - strand, within mltC at 1603.560 kb on + strand, within mltC at 1603.730 kb on - strand, within mltC at 1603.756 kb on - strand, within mltC at 1603.826 kb on + strand, within mltC at 1603.926 kb on + strand, within mltC at 1603.934 kb on - strand, within mltC
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 1,601,884 - +0.5 1,601,984 + -1.2 1,602,225 - DVU1534 0.57 -0.1 1,602,251 + DVU1534 0.62 -0.4 1,602,266 - DVU1534 0.65 +1.5 1,602,290 + DVU1534 0.69 +0.2 1,602,290 + DVU1534 0.69 -0.6 1,602,300 + DVU1534 0.71 +1.4 1,602,300 + DVU1534 0.71 +0.3 1,602,308 - DVU1534 0.73 -0.8 1,602,342 - DVU1534 0.79 +0.1 1,602,343 - DVU1534 0.80 -0.2 1,602,349 - DVU1534 0.81 -0.5 1,602,426 + -0.1 1,602,499 + +0.5 1,602,604 + DVU1535 0.30 -0.3 1,602,620 + DVU1535 0.33 -0.7 1,602,686 - DVU1535 0.46 +0.4 1,602,698 - DVU1535 0.48 -0.9 1,602,704 - DVU1535 0.49 -0.7 1,602,713 - DVU1535 0.51 -1.7 1,602,788 + DVU1535 0.65 -0.5 1,602,807 + DVU1535 0.69 -2.1 1,603,182 + +0.2 1,603,229 + mltC DVU1536 0.12 -0.4 1,603,351 + mltC DVU1536 0.23 +0.0 1,603,367 - mltC DVU1536 0.24 +0.4 1,603,414 + mltC DVU1536 0.28 +0.4 1,603,539 - mltC DVU1536 0.39 -1.1 1,603,560 + mltC DVU1536 0.41 +0.2 1,603,730 - mltC DVU1536 0.56 +0.1 1,603,756 - mltC DVU1536 0.58 +0.4 1,603,826 + mltC DVU1536 0.64 -0.5 1,603,926 + mltC DVU1536 0.73 +0.5 1,603,934 - mltC DVU1536 0.74 -0.2
Or see this region's nucleotide sequence