Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5095
Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,647,826 | + | +1.4 | |||
5,647,827 | - | +2.1 | |||
5,647,827 | - | -3.1 | |||
5,647,833 | - | -1.8 | |||
5,647,949 | + | +1.4 | |||
5,648,236 | - | Pf1N1B4_5094 | 0.39 | -0.4 | |
5,648,547 | + | Pf1N1B4_5094 | 0.77 | -1.0 | |
5,648,548 | - | Pf1N1B4_5094 | 0.77 | -2.1 | |
5,648,548 | - | Pf1N1B4_5094 | 0.77 | +0.2 | |
5,648,667 | + | +0.2 | |||
5,648,741 | - | -1.8 | |||
5,648,952 | + | Pf1N1B4_5095 | 0.24 | -3.6 | |
5,648,984 | - | Pf1N1B4_5095 | 0.30 | -2.3 | |
5,649,200 | - | Pf1N1B4_5095 | 0.68 | -3.1 | |
5,649,200 | - | Pf1N1B4_5095 | 0.68 | -1.8 | |
5,649,205 | - | Pf1N1B4_5095 | 0.69 | -0.8 | |
5,649,385 | + | -0.8 | |||
5,649,385 | + | -2.2 | |||
5,649,385 | + | -2.1 | |||
5,649,386 | - | -2.0 | |||
5,649,386 | - | +0.8 | |||
5,649,427 | + | +0.5 | |||
5,649,487 | + | -0.8 | |||
5,649,959 | - | Pf1N1B4_5096 | 0.17 | -0.0 | |
5,649,991 | - | -1.8 | |||
5,650,095 | + | Pf1N1B4_5096 | 0.28 | +0.8 | |
5,650,095 | + | Pf1N1B4_5096 | 0.28 | +0.9 | |
5,650,096 | - | Pf1N1B4_5096 | 0.28 | +0.4 | |
5,650,309 | - | Pf1N1B4_5096 | 0.44 | -0.4 |
Or see this region's nucleotide sequence