Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5093
Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,644,548 | + | Pf1N1B4_5092 | 0.27 | +0.5 | |
5,645,192 | - | Pf1N1B4_5092 | 0.88 | -1.8 | |
5,645,200 | - | Pf1N1B4_5092 | 0.89 | -0.9 | |
5,645,848 | - | Pf1N1B4_5093 | 0.36 | +0.8 | |
5,645,889 | + | Pf1N1B4_5093 | 0.39 | -1.8 | |
5,646,267 | - | Pf1N1B4_5093 | 0.65 | -1.8 | |
5,646,267 | - | Pf1N1B4_5093 | 0.65 | -1.2 | |
5,646,270 | + | Pf1N1B4_5093 | 0.65 | +0.7 | |
5,646,270 | + | Pf1N1B4_5093 | 0.65 | +0.2 | |
5,646,271 | - | -0.8 | |||
5,646,271 | - | Pf1N1B4_5093 | 0.65 | -0.5 | |
5,646,336 | - | -0.8 | |||
5,646,338 | + | Pf1N1B4_5093 | 0.69 | +1.1 | |
5,647,153 | + | -0.5 | |||
5,647,153 | + | -1.3 | |||
5,647,326 | + | +0.8 | |||
5,647,327 | - | -0.9 | |||
5,647,329 | - | +2.6 | |||
5,647,409 | + | -0.8 | |||
5,647,410 | - | +1.2 | |||
5,647,531 | + | +0.8 | |||
5,647,767 | - | +1.6 |
Or see this region's nucleotide sequence