Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3850

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,270,337	+				+1.0
4,270,337	+				+1.0
4,270,338	-				+1.8
4,270,338	-				+0.5
4,270,340	+				+1.9
4,270,340	+				-2.3
4,270,340	+				+0.1
4,270,340	+				-1.5
4,270,340	+				+1.6
4,270,340	+				-2.1
4,270,341	-				+0.1
4,270,341	-				+0.9
4,270,341	-				+0.7
4,270,341	-				+0.1
4,270,341	-				-1.3
4,270,459	+				+1.1
4,270,459	+				+0.7
4,270,459	+				+1.0
4,270,467	-		Pf1N1B4_3849	0.11	-1.3
4,270,467	-		Pf1N1B4_3849	0.11	+1.5
4,270,474	+		Pf1N1B4_3849	0.12	-1.1
4,270,474	+		Pf1N1B4_3849	0.12	-1.0
4,270,474	+				-1.9
4,270,474	+		Pf1N1B4_3849	0.12	+0.8
4,270,475	-		Pf1N1B4_3849	0.12	+0.3
4,270,475	-		Pf1N1B4_3849	0.12	-2.3
4,270,922	+		Pf1N1B4_3849	0.70	-1.9
4,270,922	+		Pf1N1B4_3849	0.70	+0.0
4,270,922	+		Pf1N1B4_3849	0.70	+0.5
4,270,952	+		Pf1N1B4_3849	0.74	+0.3
4,270,952	+		Pf1N1B4_3849	0.74	-0.3
4,270,953	-		Pf1N1B4_3849	0.74	+0.4
4,270,953	-		Pf1N1B4_3849	0.74	+0.7
4,271,360	+				+0.5
4,271,360	+				-0.6
4,271,360	+				+0.2
4,271,361	-				+1.4
4,271,361	-				-1.7
4,271,361	-				+0.3
4,271,361	-				-2.6
4,271,401	+				-1.1
4,271,401	+				-1.3
4,271,402	-				+0.0
4,271,402	-				+1.7
4,271,402	-				-1.3
4,271,402	-				-1.3
4,271,444	+				-0.3
4,271,469	-		Pf1N1B4_3850	0.11	-1.9
4,271,533	+		Pf1N1B4_3850	0.16	-2.3
4,271,533	+		Pf1N1B4_3850	0.16	-0.7
4,271,534	-		Pf1N1B4_3850	0.16	+0.4
4,271,564	+		Pf1N1B4_3850	0.18	+1.6
4,271,600	-		Pf1N1B4_3850	0.21	-0.5
4,271,600	-		Pf1N1B4_3850	0.21	+0.7
4,271,600	-		Pf1N1B4_3850	0.21	+0.4
4,271,615	+		Pf1N1B4_3850	0.22	-2.6
4,271,616	-		Pf1N1B4_3850	0.22	-1.9
4,271,616	-				-1.9
4,271,853	-		Pf1N1B4_3850	0.40	-1.2
4,271,861	+		Pf1N1B4_3850	0.41	-1.9
4,271,862	-		Pf1N1B4_3850	0.41	-0.9
4,271,862	-				-2.3
4,271,948	+		Pf1N1B4_3850	0.47	+2.0
4,271,949	-		Pf1N1B4_3850	0.48	-1.6
4,271,949	-		Pf1N1B4_3850	0.48	+1.3
4,271,949	-		Pf1N1B4_3850	0.48	-2.3
4,271,949	-		Pf1N1B4_3850	0.48	+0.6
4,271,949	-		Pf1N1B4_3850	0.48	-2.1
4,272,089	+		Pf1N1B4_3850	0.58	-0.3
4,272,090	-		Pf1N1B4_3850	0.58	-1.7
4,272,090	-		Pf1N1B4_3850	0.58	-1.3
4,272,090	-		Pf1N1B4_3850	0.58	-2.3
4,272,117	-				+1.7
4,272,117	-				-1.9
4,272,332	+		Pf1N1B4_3850	0.77	+0.7
4,272,332	+		Pf1N1B4_3850	0.77	+2.7
4,272,332	+		Pf1N1B4_3850	0.77	+2.7
4,272,332	+		Pf1N1B4_3850	0.77	+2.7
4,272,332	+		Pf1N1B4_3850	0.77	+1.2
4,272,333	-		Pf1N1B4_3850	0.77	-0.3
4,272,333	-		Pf1N1B4_3850	0.77	+1.1
4,272,333	-		Pf1N1B4_3850	0.77	-3.3
4,272,333	-		Pf1N1B4_3850	0.77	-0.3
4,272,333	-		Pf1N1B4_3850	0.77	-1.6
4,272,333	-				-1.3
4,272,333	-		Pf1N1B4_3850	0.77	+0.3
4,272,352	+		Pf1N1B4_3850	0.78	-1.2
4,272,352	+		Pf1N1B4_3850	0.78	-0.3
4,272,352	+		Pf1N1B4_3850	0.78	-2.3
4,272,352	+		Pf1N1B4_3850	0.78	-1.9
4,272,366	-		Pf1N1B4_3850	0.79	+0.2
4,272,551	+				-1.3
4,272,647	+				+1.7
4,272,647	+				+0.2
4,272,648	-				-2.3
4,272,766	+		Pf1N1B4_3851	0.11	-2.3
4,272,766	+		Pf1N1B4_3851	0.11	-0.7
4,272,766	+				-1.9
4,272,766	+		Pf1N1B4_3851	0.11	-0.1
4,272,766	+		Pf1N1B4_3851	0.11	-2.9
4,272,766	+		Pf1N1B4_3851	0.11	+0.0
4,272,766	+		Pf1N1B4_3851	0.11	+1.5
4,272,766	+		Pf1N1B4_3851	0.11	+0.1
4,272,767	-		Pf1N1B4_3851	0.11	-0.1
4,272,767	-		Pf1N1B4_3851	0.11	-1.9
4,273,021	+		Pf1N1B4_3851	0.40	-1.6
4,273,021	+		Pf1N1B4_3851	0.40	+0.0
4,273,022	-		Pf1N1B4_3851	0.41	-1.0
4,273,354	+		Pf1N1B4_3851	0.79	-2.3
4,273,354	+		Pf1N1B4_3851	0.79	-0.3
4,273,354	+		Pf1N1B4_3851	0.79	+2.4
4,273,355	-		Pf1N1B4_3851	0.80	+1.0
4,273,355	-		Pf1N1B4_3851	0.80	+0.3
4,273,516	+				+1.6
4,273,516	+				+1.9
4,273,516	+				-0.3
4,273,516	+				-2.3
4,273,516	+				-0.3
4,273,516	+				-0.3
4,273,517	-				-1.4
4,273,517	-				-1.9
4,273,517	-				+0.0
4,273,517	-				+0.5
4,273,517	-				-0.9
4,273,517	-				+1.0
4,273,517	-				-2.9
4,273,517	-				+1.3
4,273,517	-				-1.3