Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3826

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,238,336	+				+1.3
4,238,337	-				-3.1
4,238,337	-				-2.9
4,238,393	-				-0.3
4,238,627	+		Pf1N1B4_3824	0.36	+3.7
4,238,628	-		Pf1N1B4_3824	0.36	+0.1
4,238,663	+		Pf1N1B4_3824	0.40	+2.0
4,238,663	+		Pf1N1B4_3824	0.40	+1.4
4,238,663	+		Pf1N1B4_3824	0.40	+1.1
4,238,663	+		Pf1N1B4_3824	0.40	+2.5
4,238,663	+		Pf1N1B4_3824	0.40	-0.3
4,238,663	+		Pf1N1B4_3824	0.40	+2.2
4,238,663	+				-0.3
4,238,663	+		Pf1N1B4_3824	0.40	+1.9
4,238,664	-		Pf1N1B4_3824	0.40	+2.7
4,238,664	-		Pf1N1B4_3824	0.40	+1.5
4,238,664	-		Pf1N1B4_3824	0.40	+0.7
4,238,664	-		Pf1N1B4_3824	0.40	-0.3
4,238,664	-				-0.3
4,238,664	-		Pf1N1B4_3824	0.40	+0.4
4,238,664	-		Pf1N1B4_3824	0.40	-1.0
4,238,664	-		Pf1N1B4_3824	0.40	-1.3
4,238,664	-		Pf1N1B4_3824	0.40	-1.9
4,238,682	+				+1.7
4,238,683	-		Pf1N1B4_3824	0.42	-0.0
4,238,683	-		Pf1N1B4_3824	0.42	+0.4
4,238,704	+		Pf1N1B4_3824	0.45	+0.7
4,238,705	-				-0.9
4,238,705	-		Pf1N1B4_3824	0.45	-1.3
4,238,707	+		Pf1N1B4_3824	0.45	+1.4
4,238,707	+		Pf1N1B4_3824	0.45	+2.3
4,238,708	-		Pf1N1B4_3824	0.46	+3.8
4,238,708	-		Pf1N1B4_3824	0.46	+0.6
4,238,726	+		Pf1N1B4_3824	0.48	+1.5
4,238,726	+		Pf1N1B4_3824	0.48	+2.9
4,238,726	+		Pf1N1B4_3824	0.48	+1.3
4,238,727	-		Pf1N1B4_3824	0.48	+1.3
4,238,727	-		Pf1N1B4_3824	0.48	+1.6
4,238,727	-		Pf1N1B4_3824	0.48	+0.3
4,238,727	-		Pf1N1B4_3824	0.48	+0.9
4,238,729	+		Pf1N1B4_3824	0.48	+2.6
4,238,729	+		Pf1N1B4_3824	0.48	-0.3
4,238,729	+		Pf1N1B4_3824	0.48	+0.1
4,238,729	+		Pf1N1B4_3824	0.48	+1.9
4,238,729	+				+1.7
4,238,729	+		Pf1N1B4_3824	0.48	+1.2
4,238,729	+		Pf1N1B4_3824	0.48	+3.1
4,238,729	+		Pf1N1B4_3824	0.48	+1.6
4,238,729	+		Pf1N1B4_3824	0.48	+1.0
4,238,730	-		Pf1N1B4_3824	0.48	+2.7
4,238,792	+		Pf1N1B4_3824	0.56	+2.6
4,238,792	+		Pf1N1B4_3824	0.56	+2.0
4,238,792	+		Pf1N1B4_3824	0.56	+0.7
4,238,792	+		Pf1N1B4_3824	0.56	+2.4
4,238,792	+		Pf1N1B4_3824	0.56	+1.0
4,238,792	+		Pf1N1B4_3824	0.56	+2.5
4,238,792	+		Pf1N1B4_3824	0.56	+2.3
4,238,792	+		Pf1N1B4_3824	0.56	+1.3
4,238,793	-		Pf1N1B4_3824	0.56	+1.5
4,238,793	-		Pf1N1B4_3824	0.56	-1.3
4,238,793	-		Pf1N1B4_3824	0.56	+0.7
4,238,834	+		Pf1N1B4_3824	0.61	+1.3
4,238,834	+				+2.3
4,238,834	+		Pf1N1B4_3824	0.61	-0.3
4,238,834	+		Pf1N1B4_3824	0.61	+1.5
4,238,834	+		Pf1N1B4_3824	0.61	+2.2
4,238,835	-		Pf1N1B4_3824	0.61	-0.3
4,238,835	-		Pf1N1B4_3824	0.61	+1.8
4,238,958	+		Pf1N1B4_3824	0.76	-0.6
4,239,004	+		Pf1N1B4_3824	0.82	-1.3
4,239,004	+		Pf1N1B4_3824	0.82	+1.2
4,239,004	+		Pf1N1B4_3824	0.82	-0.3
4,239,004	+		Pf1N1B4_3824	0.82	-0.7
4,239,004	+		Pf1N1B4_3824	0.82	+2.4
4,239,004	+				+3.6
4,239,005	-		Pf1N1B4_3824	0.82	+1.1
4,239,005	-		Pf1N1B4_3824	0.82	-1.6
4,239,038	+		Pf1N1B4_3824	0.86	+1.7
4,239,038	+		Pf1N1B4_3824	0.86	+2.3
4,239,038	+				+2.3
4,239,038	+		Pf1N1B4_3824	0.86	+1.3
4,239,038	+		Pf1N1B4_3824	0.86	+1.5
4,239,039	-		Pf1N1B4_3824	0.86	-1.3
4,239,063	+		Pf1N1B4_3824	0.89	+1.8
4,239,063	+		Pf1N1B4_3824	0.89	+2.4
4,239,174	+				-0.3
4,239,174	+				+1.5
4,239,174	+				-2.6
4,239,174	+				+0.2
4,239,175	-				-2.9
4,239,192	-				-1.4
4,239,193	+				-0.3
4,239,193	+				+2.3
4,239,193	+				-1.1
4,239,193	+				-0.3
4,239,193	+				+0.7
4,239,193	+				+0.5
4,239,193	+				+0.5
4,239,193	+				+1.1
4,239,193	+				+1.2
4,239,193	+				+1.7
4,239,193	+				+0.3
4,239,193	+				-0.3
4,239,193	+				-0.3
4,239,193	+				-0.3
4,239,193	+				+2.6
4,239,193	+				+0.5
4,239,193	+				+2.1
4,239,193	+				+0.7
4,239,194	-				-2.3
4,239,194	-				-2.9
4,239,194	-				-2.3
4,239,194	-				-0.3
4,239,194	-				+0.7
4,239,194	-				-1.3
4,239,196	+				+1.3
4,239,196	+				-0.3
4,239,196	+				+2.1
4,239,196	+				+0.9
4,239,197	-				-2.3
4,239,237	+				-0.3
4,239,237	+				+2.5
4,239,257	+		Pf1N1B4_3825	0.18	-1.3
4,239,257	+		Pf1N1B4_3825	0.18	-0.3
4,239,257	+		Pf1N1B4_3825	0.18	-1.3
4,239,257	+		Pf1N1B4_3825	0.18	+0.7
4,239,312	+		Pf1N1B4_3825	0.58	+0.4
4,239,312	+		Pf1N1B4_3825	0.58	-0.3
4,239,313	-		Pf1N1B4_3825	0.59	+3.6
4,239,313	-		Pf1N1B4_3825	0.59	-2.1
4,239,313	-		Pf1N1B4_3825	0.59	+0.1
4,239,313	-		Pf1N1B4_3825	0.59	-0.3
4,239,332	+				-0.1
4,239,332	+				-1.3
4,239,337	+				-1.5
4,239,337	+				-0.3
4,239,337	+				-0.3
4,239,337	+				-0.3
4,239,338	-				-1.9
4,239,338	-				-1.9
4,239,341	+				-1.3
4,239,341	+				-1.9
4,239,341	+				-1.9
4,239,341	+				+0.1
4,239,341	+				-0.3
4,239,341	+				-1.9
4,239,341	+				+2.3
4,239,341	+				-2.6
4,239,342	-				-1.2
4,239,342	-				-0.3
4,239,342	-				-3.9
4,239,342	-				+2.3
4,239,374	+				-0.3
4,239,374	+				-0.3
4,239,374	+				-1.3
4,239,374	+				-1.3
4,239,374	+				-0.9
4,239,375	-				+0.3
4,239,781	-		Pf1N1B4_3826	0.19	-0.3
4,239,781	-		Pf1N1B4_3826	0.19	-2.3
4,239,985	+		Pf1N1B4_3826	0.28	+0.4
4,239,985	+		Pf1N1B4_3826	0.28	-2.6
4,240,007	+		Pf1N1B4_3826	0.29	-2.6
4,240,007	+		Pf1N1B4_3826	0.29	-0.3
4,240,036	+		Pf1N1B4_3826	0.30	+1.1
4,240,036	+		Pf1N1B4_3826	0.30	+0.3
4,240,036	+		Pf1N1B4_3826	0.30	-1.9
4,240,036	+		Pf1N1B4_3826	0.30	-1.1
4,240,036	+		Pf1N1B4_3826	0.30	-1.0
4,240,036	+		Pf1N1B4_3826	0.30	-1.3
4,240,141	-		Pf1N1B4_3826	0.34	-1.3
4,240,249	+		Pf1N1B4_3826	0.39	+0.3
4,240,249	+		Pf1N1B4_3826	0.39	-2.3
4,240,250	-		Pf1N1B4_3826	0.39	-1.9
4,240,303	+		Pf1N1B4_3826	0.41	-1.3
4,240,303	+		Pf1N1B4_3826	0.41	-0.6
4,240,303	+		Pf1N1B4_3826	0.41	-2.8
4,240,303	+		Pf1N1B4_3826	0.41	-3.1
4,240,303	+		Pf1N1B4_3826	0.41	-2.3
4,240,304	-		Pf1N1B4_3826	0.41	-1.9
4,240,304	-		Pf1N1B4_3826	0.41	-1.9
4,240,304	-				-2.3
4,240,304	-				+1.1
4,240,304	-		Pf1N1B4_3826	0.41	-2.3
4,240,304	-		Pf1N1B4_3826	0.41	-1.4
4,240,304	-		Pf1N1B4_3826	0.41	-0.9
4,240,304	-		Pf1N1B4_3826	0.41	-2.3
4,240,304	-		Pf1N1B4_3826	0.41	+0.7
4,240,304	-		Pf1N1B4_3826	0.41	-2.3
4,240,304	-				-1.3
4,240,304	-		Pf1N1B4_3826	0.41	-0.3
4,240,304	-		Pf1N1B4_3826	0.41	-3.3
4,240,699	+		Pf1N1B4_3826	0.58	-0.7
4,240,700	-		Pf1N1B4_3826	0.58	-2.6
4,240,700	-		Pf1N1B4_3826	0.58	-2.6
4,240,700	-		Pf1N1B4_3826	0.58	-3.1
4,240,906	+		Pf1N1B4_3826	0.66	-1.9
4,240,906	+		Pf1N1B4_3826	0.66	-3.3
4,240,981	+		Pf1N1B4_3826	0.70	-3.3
4,240,981	+		Pf1N1B4_3826	0.70	+1.9
4,240,981	+		Pf1N1B4_3826	0.70	-1.6
4,240,981	+		Pf1N1B4_3826	0.70	-2.9
4,240,981	+		Pf1N1B4_3826	0.70	-1.9
4,240,982	-		Pf1N1B4_3826	0.70	-1.3
4,241,104	+		Pf1N1B4_3826	0.75	-1.9
4,241,155	+		Pf1N1B4_3826	0.77	-0.3
4,241,155	+		Pf1N1B4_3826	0.77	-2.3
4,241,156	-		Pf1N1B4_3826	0.77	-0.9
4,241,156	-		Pf1N1B4_3826	0.77	-1.3
4,241,496	+				-1.1
4,241,496	+				-2.3
4,241,529	+				-2.6
4,241,529	+				-2.3
4,241,557	+				-0.3
4,241,558	-				-0.3
4,241,754	+				-0.3
4,241,768	+				+0.1
4,241,769	-				+0.7
4,241,769	-				-1.4
4,241,843	+				-2.3
4,241,843	+				-1.8
4,241,844	-				+1.1
4,241,844	-				+0.2
4,241,844	-				+0.2
4,241,851	+				-1.0
4,241,897	-				-2.0
4,241,897	-				-1.8
4,241,897	-				-1.1
4,241,916	+				-0.3
4,241,916	+				-1.3
4,241,916	+				+1.3
4,241,916	+				+0.3
4,241,916	+				+0.2
4,241,917	-				-1.6
4,241,917	-				-0.3
4,241,917	-				-2.3
4,241,917	-				-0.3
4,241,917	-				-0.6
4,241,917	-				-0.3
4,241,917	-				-1.5
4,242,141	-		Pf1N1B4_3827	0.25	-1.7
4,242,141	-		Pf1N1B4_3827	0.25	+0.1
4,242,248	+		Pf1N1B4_3827	0.35	-0.7
4,242,359	+		Pf1N1B4_3827	0.47	-0.8
4,242,359	+		Pf1N1B4_3827	0.47	-0.3
4,242,359	+		Pf1N1B4_3827	0.47	-1.3
4,242,359	+		Pf1N1B4_3827	0.47	-0.7
4,242,359	+		Pf1N1B4_3827	0.47	-0.5
4,242,359	+		Pf1N1B4_3827	0.47	-0.8
4,242,359	+		Pf1N1B4_3827	0.47	+1.3
4,242,360	-		Pf1N1B4_3827	0.47	+0.7
4,242,360	-		Pf1N1B4_3827	0.47	+1.5
4,242,360	-		Pf1N1B4_3827	0.47	+0.2
4,242,360	-		Pf1N1B4_3827	0.47	-0.3
4,242,360	-		Pf1N1B4_3827	0.47	-2.3
4,242,360	-		Pf1N1B4_3827	0.47	-0.5
4,242,360	-		Pf1N1B4_3827	0.47	-0.3
4,242,360	-		Pf1N1B4_3827	0.47	+0.4
4,242,360	-		Pf1N1B4_3827	0.47	+0.3
4,242,360	-		Pf1N1B4_3827	0.47	-0.3
4,242,360	-		Pf1N1B4_3827	0.47	-0.3
4,242,360	-		Pf1N1B4_3827	0.47	-0.3
4,242,415	+		Pf1N1B4_3827	0.52	-1.3
4,242,416	-		Pf1N1B4_3827	0.52	+0.0
4,242,420	-				+1.7