Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3542

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
3,947,186	+		Pf1N1B4_3540	0.38	-1.1
3,947,186	+		Pf1N1B4_3540	0.38	-0.3
3,947,186	+		Pf1N1B4_3540	0.38	+1.2
3,947,187	-		Pf1N1B4_3540	0.38	-1.1
3,947,187	-		Pf1N1B4_3540	0.38	-2.1
3,947,187	-		Pf1N1B4_3540	0.38	+2.7
3,947,187	-		Pf1N1B4_3540	0.38	-0.1
3,947,190	-		Pf1N1B4_3540	0.39	+3.2
3,947,282	+		Pf1N1B4_3540	0.54	+1.9
3,947,330	+		Pf1N1B4_3540	0.63	-2.1
3,947,330	+				-0.1
3,947,331	-		Pf1N1B4_3540	0.63	+1.9
3,947,331	-		Pf1N1B4_3540	0.63	+0.6
3,947,331	-		Pf1N1B4_3540	0.63	-2.7
3,947,331	-		Pf1N1B4_3540	0.63	+0.5
3,947,331	-		Pf1N1B4_3540	0.63	+1.1
3,947,331	-		Pf1N1B4_3540	0.63	-1.4
3,947,331	-				-1.1
3,947,425	+		Pf1N1B4_3540	0.79	+0.5
3,947,523	+				-1.4
3,947,524	-				-0.1
3,947,592	+				+0.1
3,947,652	-				-1.1
3,947,652	-				-0.1
3,947,684	+		Pf1N1B4_3541	0.11	+0.9
3,947,685	-		Pf1N1B4_3541	0.11	+0.9
3,947,685	-		Pf1N1B4_3541	0.11	+0.9
3,947,778	+				+1.9
3,947,778	+		Pf1N1B4_3541	0.41	+1.5
3,947,778	+		Pf1N1B4_3541	0.41	+1.2
3,947,778	+		Pf1N1B4_3541	0.41	-0.1
3,947,779	-		Pf1N1B4_3541	0.41	+1.1
3,947,779	-		Pf1N1B4_3541	0.41	-0.1
3,947,779	-		Pf1N1B4_3541	0.41	-1.7
3,947,779	-		Pf1N1B4_3541	0.41	+1.5
3,947,913	-		Pf1N1B4_3541	0.84	-1.5
3,948,015	+				+2.5
3,948,015	+				-2.7
3,948,016	-				+1.1
3,948,019	+				+0.2
3,948,020	-				+1.9
3,948,020	-				-0.1
3,948,057	-				+2.5
3,948,068	+				+0.5
3,948,069	-				-0.5
3,948,109	+				-1.1
3,948,113	-				-0.4
3,948,225	+				+0.6
3,948,483	+		Pf1N1B4_3542	0.32	+1.6
3,948,648	+		Pf1N1B4_3542	0.48	+0.5
3,948,648	+		Pf1N1B4_3542	0.48	-1.1
3,948,648	+		Pf1N1B4_3542	0.48	+1.5
3,948,648	+				-1.1
3,948,648	+		Pf1N1B4_3542	0.48	-0.7
3,948,648	+		Pf1N1B4_3542	0.48	-1.4
3,948,648	+		Pf1N1B4_3542	0.48	+0.5
3,948,648	+		Pf1N1B4_3542	0.48	-0.1
3,948,649	-		Pf1N1B4_3542	0.48	-2.9
3,948,690	+		Pf1N1B4_3542	0.52	+0.9
3,948,691	-				-0.1
3,948,691	-		Pf1N1B4_3542	0.52	-1.1
3,948,786	+		Pf1N1B4_3542	0.62	-3.5
3,948,787	-		Pf1N1B4_3542	0.62	-0.1
3,948,838	+				-1.1
3,948,838	+		Pf1N1B4_3542	0.67	-0.3
3,948,875	+		Pf1N1B4_3542	0.70	+0.5
3,948,990	+		Pf1N1B4_3542	0.81	+0.9
3,948,990	+				+0.9
3,948,990	+				-1.1
3,948,991	-		Pf1N1B4_3542	0.81	+0.5
3,948,991	-		Pf1N1B4_3542	0.81	-0.5
3,949,029	+				-0.7
3,949,139	+				-1.1
3,949,140	-				-1.4
3,949,179	+				+0.2
3,949,448	+		Pf1N1B4_3543	0.21	+1.1
3,949,449	-		Pf1N1B4_3543	0.21	+2.2
3,949,449	-		Pf1N1B4_3543	0.21	-1.5
3,949,449	-		Pf1N1B4_3543	0.21	+0.9
3,949,449	-		Pf1N1B4_3543	0.21	+0.6
3,949,449	-		Pf1N1B4_3543	0.21	-0.8
3,949,477	+		Pf1N1B4_3543	0.23	-2.1
3,949,478	-		Pf1N1B4_3543	0.23	-0.8
3,949,489	-		Pf1N1B4_3543	0.24	+0.3
3,949,511	+		Pf1N1B4_3543	0.26	+1.6
3,949,511	+		Pf1N1B4_3543	0.26	+1.2
3,949,511	+		Pf1N1B4_3543	0.26	+1.2
3,949,511	+		Pf1N1B4_3543	0.26	+1.1
3,949,512	-		Pf1N1B4_3543	0.26	-2.7
3,949,512	-		Pf1N1B4_3543	0.26	+1.9
3,949,512	-		Pf1N1B4_3543	0.26	+0.6
3,949,583	+		Pf1N1B4_3543	0.31	+0.3
3,949,584	-		Pf1N1B4_3543	0.31	+1.9
3,949,622	+		Pf1N1B4_3543	0.33	-0.4
3,949,622	+		Pf1N1B4_3543	0.33	+2.0
3,949,758	+		Pf1N1B4_3543	0.43	-0.1
3,949,826	+		Pf1N1B4_3543	0.47	-0.4
3,949,826	+		Pf1N1B4_3543	0.47	-1.4
3,949,826	+		Pf1N1B4_3543	0.47	-0.7
3,949,826	+		Pf1N1B4_3543	0.47	-0.1
3,949,826	+		Pf1N1B4_3543	0.47	-0.1
3,949,826	+		Pf1N1B4_3543	0.47	+2.2
3,949,826	+		Pf1N1B4_3543	0.47	-0.1
3,949,827	-		Pf1N1B4_3543	0.47	-2.1
3,949,827	-		Pf1N1B4_3543	0.47	-1.0
3,949,827	-		Pf1N1B4_3543	0.47	-0.4
3,949,827	-		Pf1N1B4_3543	0.47	-2.1
3,950,027	+		Pf1N1B4_3543	0.61	-1.7
3,950,027	+		Pf1N1B4_3543	0.61	-2.9
3,950,027	+				-1.1