Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_160

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
200,935	+		Pf1N1B4_158	0.46	-0.2
200,935	+		Pf1N1B4_158	0.46	+0.1
200,956	-				-1.2
200,959	-		Pf1N1B4_158	0.53	-0.8
200,959	-		Pf1N1B4_158	0.53	-1.3
200,959	-		Pf1N1B4_158	0.53	-1.5
201,090	+				-0.6
201,091	-				-0.2
201,095	-				+0.8
201,108	+				-0.8
201,108	+				+0.6
201,108	+				-1.8
201,108	+				+0.4
201,108	+				-0.9
201,109	-				-0.2
201,109	-				-0.2
201,231	+				-1.8
201,255	+		Pf1N1B4_159	0.18	+1.1
201,256	-		Pf1N1B4_159	0.19	-2.8
201,392	-		Pf1N1B4_159	0.40	-2.5
201,665	+		Pf1N1B4_159	0.83	+0.7
201,666	-		Pf1N1B4_159	0.84	-1.2
201,797	-				-0.6
201,797	-				+0.8
201,801	+				-1.2
201,801	+				-2.5
201,840	+				-1.5
202,002	+		Pf1N1B4_160	0.11	-0.2
202,003	-				+1.4
202,168	+		Pf1N1B4_160	0.23	+0.8
202,169	-		Pf1N1B4_160	0.23	+1.0
202,280	-		Pf1N1B4_160	0.32	+2.1
202,280	-		Pf1N1B4_160	0.32	+1.5
202,407	+		Pf1N1B4_160	0.41	+0.2
202,534	-		Pf1N1B4_160	0.51	-1.2
202,647	+		Pf1N1B4_160	0.60	-3.4
202,648	-		Pf1N1B4_160	0.60	-0.6
202,685	+		Pf1N1B4_160	0.62	-1.8
202,685	+		Pf1N1B4_160	0.62	-1.8
202,686	-		Pf1N1B4_160	0.62	+0.7
202,686	-		Pf1N1B4_160	0.62	-1.0
202,710	+		Pf1N1B4_160	0.64	-0.2
202,710	+		Pf1N1B4_160	0.64	-1.5
202,711	-		Pf1N1B4_160	0.64	+0.2
202,711	-		Pf1N1B4_160	0.64	+0.8
202,711	-		Pf1N1B4_160	0.64	-0.9
202,711	-		Pf1N1B4_160	0.64	-1.8
202,711	-		Pf1N1B4_160	0.64	+0.7
202,711	-		Pf1N1B4_160	0.64	-1.2
202,711	-		Pf1N1B4_160	0.64	-0.8
202,711	-		Pf1N1B4_160	0.64	+0.8
202,711	-				-1.2
202,711	-		Pf1N1B4_160	0.64	+0.6
202,711	-		Pf1N1B4_160	0.64	+0.5
202,713	-		Pf1N1B4_160	0.64	-0.4
202,772	+		Pf1N1B4_160	0.69	+1.6
202,773	-		Pf1N1B4_160	0.69	+0.5
202,773	-		Pf1N1B4_160	0.69	+1.1
202,773	-		Pf1N1B4_160	0.69	+0.6
202,773	-		Pf1N1B4_160	0.69	-2.8
202,977	+		Pf1N1B4_160	0.84	+1.7
202,978	-		Pf1N1B4_160	0.84	-0.2
202,978	-		Pf1N1B4_160	0.84	+0.8
202,980	+		Pf1N1B4_160	0.85	+0.8
202,980	+		Pf1N1B4_160	0.85	+1.4
202,980	+		Pf1N1B4_160	0.85	-2.2
202,980	+		Pf1N1B4_160	0.85	-2.8
202,981	-		Pf1N1B4_160	0.85	+0.3
202,981	-		Pf1N1B4_160	0.85	-2.8
203,008	+				+2.8
203,043	-		Pf1N1B4_160	0.89	+1.7
203,269	+				-1.2
203,327	+				+1.8
203,328	-				-1.2
203,328	-				-0.5
203,359	+				-0.2
203,359	+				-0.8
203,360	-				-2.5
203,360	-				-1.4
203,360	-				-1.2
203,369	+				+2.4
203,370	-				-0.8
203,375	+				-0.2
203,375	+				-0.2
203,376	-				+3.0
203,487	-		Pf1N1B4_161	0.85	-0.6
203,540	+				-0.2
203,540	+				+0.8
203,541	-				-0.2
203,541	-				-1.8
203,541	-				+0.4
203,541	-				+0.4
203,541	-				-2.8
203,541	-				+1.0
203,577	+				+1.2
203,578	-				-0.5
203,578	-				+1.0
203,578	-				-2.2
203,578	-				+2.8
203,578	-				+1.1
203,578	-				+0.6
203,578	-				+0.5
203,578	-				+1.0
203,578	-				-0.2
203,578	-				+0.5
203,578	-				+0.8
203,578	-				-1.2
203,578	-				+1.0
203,578	-				+0.5
203,578	-				-0.9
203,578	-				+1.1
203,578	-				-0.6
203,581	+				-2.5
203,582	-				-0.5
203,582	-				-1.8
203,582	-				-0.7
203,582	-				+0.5
203,582	-				-2.2
203,582	-				-0.3
203,593	+				+1.5
203,594	-				-0.2
203,594	-				+0.8
203,607	+				-0.1
203,635	+				-1.2
203,636	-				-0.2
203,636	-				+1.7
203,985	+		Pf1N1B4_162	0.62	+0.8
203,986	-		Pf1N1B4_162	0.62	+0.8
203,986	-		Pf1N1B4_162	0.62	+2.0
204,047	+		Pf1N1B4_162	0.75	-0.2
204,170	+				-1.8
204,170	+				+3.2
204,170	+				-0.5
204,170	+				-3.0
204,170	+				+1.7
204,171	-				-0.2
204,171	-				-0.4
204,171	-				-0.4
204,171	-				-0.6