Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1132

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
1,269,284	-				+0.3
1,269,284	-				+1.3
1,269,287	+				+0.8
1,269,287	+				+1.3
1,269,287	+				-1.2
1,269,288	-				-0.7
1,269,288	-				-1.7
1,269,297	+				+1.0
1,269,297	+				-2.2
1,269,297	+				-0.7
1,269,297	+				+1.3
1,269,297	+				-0.7
1,269,297	+				-1.5
1,269,301	+				-1.1
1,269,301	+				+1.3
1,269,301	+				+1.6
1,269,301	+				+0.7
1,269,302	-				-0.7
1,269,313	+				-1.7
1,269,313	+				-2.5
1,269,313	+				-0.1
1,269,313	+				-0.7
1,269,314	-				+1.7
1,269,314	-				-1.2
1,269,352	+				+1.3
1,269,352	+				-0.5
1,269,353	-				-0.7
1,269,399	-				+0.3
1,269,422	-				-0.1
1,269,537	+				+1.3
1,269,553	+				-0.7
1,269,553	+				-3.0
1,269,554	-				+0.9
1,269,645	+		Pf1N1B4_1131	0.17	-0.0
1,269,697	+		Pf1N1B4_1131	0.24	+0.9
1,269,697	+		Pf1N1B4_1131	0.24	+0.8
1,269,698	-		Pf1N1B4_1131	0.24	-0.7
1,269,698	-		Pf1N1B4_1131	0.24	+1.5
1,269,698	-		Pf1N1B4_1131	0.24	-1.2
1,269,698	-		Pf1N1B4_1131	0.24	-1.2
1,269,698	-		Pf1N1B4_1131	0.24	+3.9
1,269,806	-		Pf1N1B4_1131	0.39	-1.0
1,269,900	+		Pf1N1B4_1131	0.52	-0.9
1,269,900	+		Pf1N1B4_1131	0.52	-0.1
1,269,900	+		Pf1N1B4_1131	0.52	+0.0
1,269,900	+		Pf1N1B4_1131	0.52	+0.0
1,269,900	+		Pf1N1B4_1131	0.52	-1.0
1,269,901	-		Pf1N1B4_1131	0.52	-1.1
1,269,901	-		Pf1N1B4_1131	0.52	-0.7
1,269,977	-		Pf1N1B4_1131	0.63	-0.4
1,270,053	-		Pf1N1B4_1131	0.74	-0.7
1,270,239	+				-0.2
1,270,239	+				-2.2
1,270,239	+				-0.4
1,270,240	-				+0.0
1,270,240	-				-1.2
1,270,240	-				+0.3
1,270,240	-				+2.1
1,270,278	+				+0.8
1,270,278	+				-0.9
1,270,278	+				-1.2
1,270,279	-				-0.7
1,270,279	-				+0.3
1,270,281	+				+2.1
1,270,281	+				+0.3
1,270,281	+				+0.3
1,270,282	-				+1.2
1,270,282	-				-1.2
1,270,282	-				-0.7
1,270,284	+				-1.1
1,270,285	-				+2.2
1,270,285	-				-0.5
1,270,285	-				+0.3
1,270,398	-		Pf1N1B4_1132	0.15	+1.3
1,270,415	+		Pf1N1B4_1132	0.17	-2.0
1,270,416	-		Pf1N1B4_1132	0.17	-1.2
1,270,523	+		Pf1N1B4_1132	0.29	+3.3
1,270,524	-		Pf1N1B4_1132	0.29	-0.2
1,270,524	-		Pf1N1B4_1132	0.29	+0.3
1,270,524	-		Pf1N1B4_1132	0.29	+0.8
1,270,634	+		Pf1N1B4_1132	0.42	+0.0
1,270,634	+		Pf1N1B4_1132	0.42	-1.2
1,270,635	-		Pf1N1B4_1132	0.42	+0.3
1,270,635	-		Pf1N1B4_1132	0.42	+0.0
1,270,635	-		Pf1N1B4_1132	0.42	+0.3
1,270,635	-		Pf1N1B4_1132	0.42	+1.7
1,270,670	+		Pf1N1B4_1132	0.46	-2.0
1,270,854	-		Pf1N1B4_1132	0.66	-1.7
1,270,854	-		Pf1N1B4_1132	0.66	-2.2
1,270,896	-				+2.3
1,270,896	-		Pf1N1B4_1132	0.71	+1.6
1,270,896	-		Pf1N1B4_1132	0.71	+0.3
1,270,955	+		Pf1N1B4_1132	0.78	+0.3
1,270,955	+		Pf1N1B4_1132	0.78	-1.2
1,270,955	+		Pf1N1B4_1132	0.78	-2.0
1,270,955	+		Pf1N1B4_1132	0.78	-0.1
1,270,955	+				+0.3
1,270,955	+		Pf1N1B4_1132	0.78	-2.7
1,270,955	+		Pf1N1B4_1132	0.78	+2.9
1,270,955	+		Pf1N1B4_1132	0.78	+1.1
1,270,955	+		Pf1N1B4_1132	0.78	-2.7
1,270,956	-		Pf1N1B4_1132	0.78	+0.5
1,270,956	-		Pf1N1B4_1132	0.78	-2.0
1,270,956	-		Pf1N1B4_1132	0.78	+0.3
1,270,956	-		Pf1N1B4_1132	0.78	+0.2
1,270,967	+		Pf1N1B4_1132	0.79	-2.7
1,270,967	+		Pf1N1B4_1132	0.79	+1.5
1,270,967	+		Pf1N1B4_1132	0.79	-0.2
1,270,998	-		Pf1N1B4_1132	0.82	+2.3
1,271,396	+		Pf1N1B4_1133	0.35	-0.3
1,271,397	-		Pf1N1B4_1133	0.35	+1.6
1,271,483	+		Pf1N1B4_1133	0.48	+1.3
1,271,483	+				+0.3
1,271,483	+		Pf1N1B4_1133	0.48	+1.3
1,271,483	+		Pf1N1B4_1133	0.48	+1.3
1,271,483	+		Pf1N1B4_1133	0.48	-0.1
1,271,484	-		Pf1N1B4_1133	0.48	+1.2
1,271,484	-		Pf1N1B4_1133	0.48	+0.3
1,271,484	-		Pf1N1B4_1133	0.48	-0.7
1,271,484	-		Pf1N1B4_1133	0.48	+1.1
1,271,484	-		Pf1N1B4_1133	0.48	+1.3
1,271,484	-		Pf1N1B4_1133	0.48	-2.5
1,271,679	+		Pf1N1B4_1133	0.78	+2.1
1,271,679	+		Pf1N1B4_1133	0.78	+0.3
1,271,680	-		Pf1N1B4_1133	0.78	+0.7
1,271,680	-		Pf1N1B4_1133	0.78	+0.6
1,271,680	-		Pf1N1B4_1133	0.78	-0.7
1,272,054	+				+2.7
1,272,054	+		Pf1N1B4_1134	0.20	+0.8
1,272,055	-		Pf1N1B4_1134	0.20	-0.7
1,272,055	-		Pf1N1B4_1134	0.20	+0.5
1,272,064	+		Pf1N1B4_1134	0.21	-0.7
1,272,065	-		Pf1N1B4_1134	0.21	+0.3
1,272,065	-		Pf1N1B4_1134	0.21	+2.3