Experiment: Cephalothin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3359 and Ac3H11_3360 are separated by 652 nucleotides Ac3H11_3360 and Ac3H11_3361 are separated by 16 nucleotides
Ac3H11_3359 - response regulatory protein, at 42,152 to 42,793
_3359
Ac3H11_3360 - Response regulator receiver:Transcriptional regulatory protein, C terminal, at 43,446 to 44,168
_3360
Ac3H11_3361 - Copper sensory histidine kinase CpxA, at 44,185 to 45,468
_3361
Position (kb) 43
44
45 Strain fitness (log2 ratio) -2
-1
0
1
2 at 42.702 kb on + strand, within Ac3H11_3359 at 42.703 kb on - strand, within Ac3H11_3359 at 42.862 kb on + strand at 42.862 kb on + strand at 42.862 kb on + strand at 42.862 kb on + strand at 42.863 kb on - strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.987 kb on + strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.988 kb on - strand at 42.999 kb on + strand at 43.069 kb on + strand at 43.070 kb on - strand at 43.157 kb on + strand at 43.158 kb on - strand at 43.187 kb on - strand at 43.187 kb on - strand at 43.187 kb on - strand at 43.298 kb on + strand at 43.299 kb on - strand at 43.300 kb on + strand at 43.347 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.418 kb on + strand at 43.419 kb on - strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.434 kb on + strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.435 kb on - strand at 43.506 kb on + strand at 43.507 kb on - strand at 43.507 kb on - strand at 43.764 kb on + strand, within Ac3H11_3360 at 43.765 kb on - strand, within Ac3H11_3360 at 43.944 kb on + strand, within Ac3H11_3360 at 43.944 kb on + strand, within Ac3H11_3360 at 44.142 kb on + strand at 44.142 kb on + strand at 44.142 kb on + strand at 44.143 kb on - strand at 44.143 kb on - strand at 44.143 kb on - strand at 44.219 kb on - strand at 44.624 kb on - strand, within Ac3H11_3361 at 44.644 kb on - strand, within Ac3H11_3361 at 44.990 kb on - strand, within Ac3H11_3361 at 45.158 kb on - strand, within Ac3H11_3361
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.025 mg/ml remove 42,702 + Ac3H11_3359 0.86 +0.4 42,703 - Ac3H11_3359 0.86 -0.4 42,862 + -0.4 42,862 + -0.9 42,862 + +0.7 42,862 + +0.7 42,863 - +0.5 42,987 + -0.2 42,987 + -0.1 42,987 + -0.3 42,987 + -0.6 42,987 + +0.4 42,987 + +2.0 42,987 + -0.8 42,988 - +0.4 42,988 - -0.8 42,988 - +0.2 42,988 - -1.8 42,999 + -0.3 43,069 + -0.1 43,070 - -0.2 43,157 + -0.8 43,158 - -0.3 43,187 - +0.4 43,187 - +1.6 43,187 - -0.1 43,298 + +0.7 43,299 - +0.0 43,300 + -0.1 43,347 + -0.6 43,418 + -2.1 43,418 + -1.6 43,418 + -0.2 43,418 + +0.5 43,418 + +0.6 43,418 + +1.0 43,419 - +0.5 43,434 + +0.1 43,434 + -0.9 43,434 + +1.0 43,434 + -0.0 43,434 + +0.9 43,435 - +0.4 43,435 - +0.1 43,435 - +0.8 43,435 - -0.5 43,435 - +1.2 43,435 - -0.2 43,435 - +0.4 43,506 + -1.8 43,507 - -0.3 43,507 - -0.1 43,764 + Ac3H11_3360 0.44 +0.1 43,765 - Ac3H11_3360 0.44 -0.3 43,944 + Ac3H11_3360 0.69 -1.8 43,944 + Ac3H11_3360 0.69 +0.2 44,142 + +0.4 44,142 + +0.9 44,142 + +0.7 44,143 - -0.3 44,143 - +0.5 44,143 - -0.5 44,219 - +0.3 44,624 - Ac3H11_3361 0.34 -0.3 44,644 - Ac3H11_3361 0.36 +0.1 44,990 - Ac3H11_3361 0.63 +0.6 45,158 - Ac3H11_3361 0.76 +0.8
Or see this region's nucleotide sequence