Experiment: Cephalothin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2839 and Ac3H11_2840 are separated by 98 nucleotides Ac3H11_2840 and Ac3H11_2841 are separated by 41 nucleotides Ac3H11_2841 and Ac3H11_2842 are separated by 3 nucleotides Ac3H11_2842 and Ac3H11_2843 are separated by 259 nucleotides
Ac3H11_2839 - FOG: HEAT repeat, at 1,146,907 to 1,147,116
_2839
Ac3H11_2840 - Ferric siderophore transport system, periplasmic binding protein TonB, at 1,147,215 to 1,147,901
_2840
Ac3H11_2841 - MotA/TolQ/ExbB proton channel family protein, at 1,147,943 to 1,148,662
_2841
Ac3H11_2842 - Biopolymer transport protein ExbD/TolR, at 1,148,666 to 1,149,073
_2842
Ac3H11_2843 - Hemin uptake protein, at 1,149,333 to 1,149,575
_2843
Position (kb)
1147
1148
1149 Strain fitness (log2 ratio)
-2
-1
0
1 at 1147.156 kb on - strand at 1147.169 kb on + strand at 1147.187 kb on + strand at 1147.214 kb on + strand at 1147.214 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.660 kb on + strand at 1148.661 kb on - strand at 1148.661 kb on - strand at 1149.071 kb on + strand at 1149.071 kb on + strand at 1149.071 kb on + strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.072 kb on - strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.075 kb on + strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.076 kb on - strand at 1149.085 kb on + strand at 1149.101 kb on + strand at 1149.101 kb on + strand at 1149.102 kb on - strand at 1149.102 kb on - strand at 1149.102 kb on - strand at 1149.232 kb on + strand at 1149.232 kb on + strand at 1149.233 kb on - strand at 1149.233 kb on - strand at 1149.233 kb on - strand at 1149.233 kb on - strand at 1149.233 kb on - strand at 1149.233 kb on - strand at 1149.335 kb on - strand at 1149.529 kb on - strand, within Ac3H11_2843 at 1149.573 kb on + strand at 1149.573 kb on + strand at 1149.573 kb on + strand at 1149.573 kb on + strand at 1149.573 kb on + strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand at 1149.574 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.025 mg/ml remove 1,147,156 - -0.1 1,147,169 + -0.1 1,147,187 + -0.2 1,147,214 + -1.9 1,147,214 + +0.9 1,148,660 + +0.8 1,148,660 + -1.0 1,148,660 + +0.1 1,148,660 + +0.6 1,148,660 + -0.1 1,148,660 + +0.3 1,148,660 + -0.8 1,148,660 + +0.0 1,148,660 + +0.1 1,148,661 - -0.9 1,148,661 - -0.1 1,149,071 + +0.8 1,149,071 + +1.0 1,149,071 + +0.6 1,149,072 - -0.1 1,149,072 - +0.7 1,149,072 - -0.9 1,149,072 - +0.6 1,149,072 - -0.5 1,149,072 - +0.0 1,149,072 - -0.5 1,149,072 - -2.2 1,149,072 - -1.6 1,149,072 - -1.3 1,149,075 + -0.9 1,149,075 + -2.4 1,149,075 + -0.7 1,149,075 + -0.3 1,149,075 + -0.0 1,149,075 + -0.8 1,149,075 + +0.3 1,149,075 + +0.1 1,149,075 + +0.6 1,149,075 + -0.2 1,149,076 - -0.9 1,149,076 - -0.9 1,149,076 - +0.3 1,149,076 - +0.5 1,149,076 - -0.4 1,149,076 - -0.9 1,149,076 - +0.4 1,149,076 - -1.1 1,149,085 + -0.1 1,149,101 + -0.0 1,149,101 + +1.7 1,149,102 - +0.0 1,149,102 - +0.4 1,149,102 - +0.4 1,149,232 + -0.3 1,149,232 + -0.7 1,149,233 - -0.1 1,149,233 - -0.8 1,149,233 - -0.0 1,149,233 - +0.5 1,149,233 - +0.6 1,149,233 - -0.3 1,149,335 - -0.8 1,149,529 - Ac3H11_2843 0.81 +1.0 1,149,573 + -0.4 1,149,573 + -0.2 1,149,573 + -0.3 1,149,573 + -0.1 1,149,573 + +0.6 1,149,574 - -1.1 1,149,574 - -1.6 1,149,574 - -0.3 1,149,574 - -0.9 1,149,574 - +0.0 1,149,574 - +0.3 1,149,574 - +0.5 1,149,574 - +0.7 1,149,574 - -1.0 1,149,574 - +1.1
Or see this region's nucleotide sequence