Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28720

Experiment: methylglyoxal 0.009 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.009 vol%
6,251,735	-		AO353_28715	0.37	-1.6
6,251,735	-		AO353_28715	0.37	+0.0
6,251,735	-		AO353_28715	0.37	+2.2
6,251,752	+				-1.8
6,251,752	+		AO353_28715	0.40	+1.0
6,251,753	-		AO353_28715	0.40	+0.7
6,251,753	-		AO353_28715	0.40	+0.8
6,251,753	-		AO353_28715	0.40	-2.8
6,251,842	+		AO353_28715	0.56	-0.2
6,251,842	+		AO353_28715	0.56	-0.5
6,251,843	-		AO353_28715	0.56	-2.4
6,251,843	-		AO353_28715	0.56	-0.3
6,251,843	-		AO353_28715	0.56	-1.2
6,251,843	-		AO353_28715	0.56	-0.2
6,251,869	+		AO353_28715	0.61	-0.8
6,251,870	-		AO353_28715	0.61	-0.4
6,251,893	+		AO353_28715	0.65	-0.8
6,251,893	+		AO353_28715	0.65	+1.3
6,251,894	-		AO353_28715	0.65	-1.6
6,251,929	+		AO353_28715	0.71	-2.4
6,251,929	+		AO353_28715	0.71	+1.3
6,251,929	+		AO353_28715	0.71	-1.2
6,251,929	+				-1.2
6,251,929	+		AO353_28715	0.71	-1.2
6,251,930	-		AO353_28715	0.71	-0.8
6,251,930	-		AO353_28715	0.71	+0.2
6,251,930	-				-1.2
6,251,930	-		AO353_28715	0.71	+0.8
6,251,930	-		AO353_28715	0.71	-1.8
6,251,992	+		AO353_28715	0.83	+0.4
6,251,993	-		AO353_28715	0.83	-1.6
6,251,993	-		AO353_28715	0.83	+0.4
6,251,993	-		AO353_28715	0.83	-0.5
6,251,993	-		AO353_28715	0.83	+2.0
6,252,083	-				-0.3
6,252,126	+				+1.3
6,252,163	+				-1.2
6,252,164	-				-0.8
6,252,169	+				-0.6
6,252,170	-				-1.1
6,252,170	-				+1.2
6,252,170	-				+1.3
6,252,172	+				+0.8
6,252,172	+				+0.2
6,252,172	+				+0.3
6,252,172	+				-0.2
6,252,173	-				-0.0
6,252,192	+				+0.8
6,252,193	-				+2.6
6,252,193	-				+0.2
6,252,198	+				+1.1
6,252,199	-				-2.0
6,252,199	-				-1.6
6,252,199	-				+0.8
6,252,199	-				-2.4
6,252,199	-				-0.4
6,252,199	-				+0.2
6,252,212	+				+0.3
6,252,212	+				-0.5
6,252,213	-				-2.4
6,252,258	+				-1.2
6,252,258	+				-1.2
6,252,258	+				-0.6
6,252,258	+				-2.4
6,252,258	+				-1.2
6,252,259	-				+2.3
6,252,259	-				-0.6
6,252,259	-				-0.6
6,252,259	-				+1.5
6,252,259	-				+0.8
6,252,259	-				-0.1
6,252,276	+				+0.4
6,252,276	+				+0.8
6,252,276	+				+0.8
6,252,276	+				+1.3
6,252,276	+				+0.3
6,252,277	-				+1.4
6,252,346	+				-0.1
6,252,347	-				+0.0
6,252,495	-				+0.2
6,252,495	-				-1.6
6,252,544	+				-0.4
6,252,545	-				-0.1
6,252,550	-				-1.6
6,252,550	-				-0.4
6,252,550	-				+0.8
6,252,608	+				+0.8
6,252,608	+				+0.0
6,252,630	+				-0.5
6,252,630	+				-0.9
6,252,630	+				-2.1
6,252,630	+				-3.5
6,252,630	+				-0.6
6,252,630	+				+0.8
6,252,630	+				+0.5
6,252,631	-				+2.2
6,252,631	-				-1.2
6,252,631	-				+1.1
6,252,631	-				+2.3
6,252,631	-				-1.8
6,252,631	-				-0.2
6,252,650	-				+1.2
6,252,650	-				+1.0
6,252,686	-				-0.4
6,252,791	-		AO353_28720	0.18	-2.1
6,252,791	-		AO353_28720	0.18	-0.8
6,252,791	-		AO353_28720	0.18	-1.6
6,252,791	-		AO353_28720	0.18	-0.8
6,252,791	-		AO353_28720	0.18	+0.8
6,252,938	+		AO353_28720	0.44	-2.2
6,252,939	-		AO353_28720	0.44	-2.9
6,252,939	-		AO353_28720	0.44	-1.2
6,252,950	+		AO353_28720	0.46	-1.6
6,252,951	-		AO353_28720	0.46	+0.0
6,252,951	-		AO353_28720	0.46	-1.4
6,253,016	+		AO353_28720	0.57	+0.4
6,253,016	+		AO353_28720	0.57	-1.6
6,253,017	-		AO353_28720	0.57	+0.2
6,253,017	-		AO353_28720	0.57	+1.8
6,253,017	-		AO353_28720	0.57	+0.4
6,253,017	-		AO353_28720	0.57	-0.6
6,253,025	+		AO353_28720	0.59	-2.6
6,253,025	+		AO353_28720	0.59	-2.2
6,253,025	+		AO353_28720	0.59	-1.2
6,253,025	+		AO353_28720	0.59	-0.8
6,253,026	-		AO353_28720	0.59	+0.4
6,253,026	-		AO353_28720	0.59	+0.6
6,253,028	+		AO353_28720	0.59	+0.8
6,253,028	+		AO353_28720	0.59	-2.6
6,253,028	+		AO353_28720	0.59	-0.2
6,253,029	-		AO353_28720	0.60	+0.5
6,253,029	-		AO353_28720	0.60	+1.3
6,253,029	-		AO353_28720	0.60	-1.2
6,253,029	-		AO353_28720	0.60	-0.2
6,253,029	-		AO353_28720	0.60	-1.2
6,253,102	+		AO353_28720	0.72	+0.3
6,253,102	+		AO353_28720	0.72	-1.6
6,253,103	-		AO353_28720	0.72	-0.2
6,253,139	+		AO353_28720	0.79	+0.9
6,253,139	+		AO353_28720	0.79	+1.3
6,253,139	+		AO353_28720	0.79	-3.4
6,253,140	-		AO353_28720	0.79	-1.6
6,253,140	-		AO353_28720	0.79	+0.2
6,253,140	-		AO353_28720	0.79	-1.6
6,253,142	+		AO353_28720	0.79	-0.8
6,253,143	-		AO353_28720	0.79	-0.8
6,253,143	-		AO353_28720	0.79	+1.1
6,253,143	-		AO353_28720	0.79	-0.7
6,253,143	-		AO353_28720	0.79	-0.8
6,253,143	-		AO353_28720	0.79	-1.1
6,253,143	-		AO353_28720	0.79	+0.3
6,253,143	-		AO353_28720	0.79	+1.0
6,253,143	-		AO353_28720	0.79	+2.3
6,253,143	-		AO353_28720	0.79	-0.1
6,253,145	+		AO353_28720	0.80	-1.3
6,253,146	-		AO353_28720	0.80	+0.1
6,253,259	+				+2.8
6,253,259	+				+1.2
6,253,259	+				-2.6
6,253,259	+				-0.7
6,253,260	-				+1.8
6,253,263	-				+0.0
6,253,297	-				-0.4
6,253,297	-				-0.6
6,253,297	-				-1.6
6,253,478	+				+0.2
6,253,531	+				-0.2
6,253,531	+				+2.8
6,253,531	+				-0.4
6,253,532	-				-1.1
6,253,532	-				-0.3
6,253,532	-				-3.6
6,253,532	-				+0.9
6,253,538	+				-1.2
6,253,541	+				-0.8
6,253,541	+				+0.2
6,253,541	+				-1.8
6,253,541	+				-1.8
6,253,541	+				+1.7
6,253,542	-				+1.8
6,253,542	-				+2.3
6,253,542	-				-2.4
6,253,542	-				-0.4
6,253,542	-				-1.4
6,253,605	-		AO353_28725	0.29	+1.9
6,253,610	+		AO353_28725	0.31	+2.3
6,253,611	-		AO353_28725	0.32	-0.7
6,253,611	-		AO353_28725	0.32	-0.2
6,253,677	-		AO353_28725	0.64	-0.2
6,253,689	+		AO353_28725	0.70	-1.4
6,253,689	+		AO353_28725	0.70	-1.2
6,253,690	-		AO353_28725	0.70	-1.6
6,253,750	-				+0.5
6,253,804	+				-1.2
6,253,804	+				-0.8
6,253,805	-				+1.8
6,253,805	-				-1.1
6,253,941	-				+3.9
6,253,967	-				-2.9
6,253,976	+				-0.3
6,253,977	-				-0.2
6,253,977	-				-2.2
6,253,977	-				+0.8
6,253,977	-				+0.8
6,253,977	-				-2.4
6,253,982	+				-1.8
6,253,982	+				+0.8
6,253,983	-				+0.3
6,253,983	-				-0.1
6,254,015	+				-0.2
6,254,015	+				+0.3
6,254,016	-				-0.2
6,254,139	+		AO353_28730	0.11	-0.9