Experiment: methylglyoxal 0.009 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26930 and AO353_26935 are separated by 78 nucleotides AO353_26935 and AO353_26940 are separated by 132 nucleotides
AO353_26930: AO353_26930 - multidrug transporter, at 5,905,432 to 5,906,382
_26930
AO353_26935: AO353_26935 - LysR family transcriptional regulator, at 5,906,461 to 5,907,333
_26935
AO353_26940: AO353_26940 - diguanylate phosphodiesterase, at 5,907,466 to 5,909,001
_26940
Position (kb) 5906
5907
5908 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5905.470 kb on + strand at 5905.471 kb on - strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.558 kb on + strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.623 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.632 kb on - strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.785 kb on - strand, within AO353_26930 at 5905.795 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.093 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.112 kb on - strand, within AO353_26930 at 5906.199 kb on + strand, within AO353_26930 at 5906.199 kb on + strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.200 kb on - strand, within AO353_26930 at 5906.206 kb on + strand, within AO353_26930 at 5906.206 kb on + strand, within AO353_26930 at 5906.207 kb on - strand, within AO353_26930 at 5906.251 kb on + strand, within AO353_26930 at 5906.252 kb on - strand, within AO353_26930 at 5906.333 kb on + strand at 5906.407 kb on + strand at 5906.407 kb on + strand at 5906.407 kb on + strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.408 kb on - strand at 5906.411 kb on + strand at 5906.412 kb on - strand at 5906.444 kb on - strand at 5906.453 kb on - strand at 5906.801 kb on - strand, within AO353_26935 at 5906.813 kb on - strand, within AO353_26935 at 5906.970 kb on + strand, within AO353_26935 at 5907.225 kb on + strand, within AO353_26935 at 5907.225 kb on + strand, within AO353_26935 at 5907.300 kb on + strand at 5907.301 kb on - strand at 5907.314 kb on + strand at 5907.314 kb on + strand at 5907.314 kb on + strand at 5907.350 kb on - strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.358 kb on + strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.359 kb on - strand at 5907.425 kb on - strand at 5907.425 kb on - strand at 5907.442 kb on - strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.542 kb on + strand at 5907.543 kb on - strand at 5907.543 kb on - strand at 5907.545 kb on + strand at 5907.545 kb on + strand at 5907.546 kb on - strand at 5907.546 kb on - strand at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.782 kb on + strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand at 5907.783 kb on - strand, within AO353_26940 at 5907.783 kb on - strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.784 kb on + strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.785 kb on - strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.797 kb on + strand, within AO353_26940 at 5907.798 kb on - strand, within AO353_26940 at 5907.798 kb on - strand, within AO353_26940 at 5907.808 kb on + strand, within AO353_26940 at 5907.809 kb on - strand, within AO353_26940 at 5907.809 kb on - strand, within AO353_26940 at 5907.836 kb on - strand, within AO353_26940 at 5907.901 kb on + strand, within AO353_26940 at 5907.901 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.992 kb on + strand, within AO353_26940 at 5907.993 kb on - strand, within AO353_26940 at 5907.998 kb on + strand, within AO353_26940 at 5907.999 kb on - strand, within AO353_26940 at 5907.999 kb on - strand, within AO353_26940 at 5908.022 kb on + strand, within AO353_26940 at 5908.023 kb on - strand, within AO353_26940 at 5908.023 kb on - strand, within AO353_26940 at 5908.026 kb on + strand, within AO353_26940 at 5908.026 kb on + strand, within AO353_26940 at 5908.062 kb on - strand, within AO353_26940 at 5908.100 kb on - strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.112 kb on + strand, within AO353_26940 at 5908.147 kb on + strand, within AO353_26940 at 5908.147 kb on + strand, within AO353_26940 at 5908.148 kb on - strand, within AO353_26940 at 5908.226 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.294 kb on + strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940 at 5908.295 kb on - strand, within AO353_26940
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.009 vol% remove 5,905,470 + -1.3 5,905,471 - +0.7 5,905,481 + -0.8 5,905,481 + +0.0 5,905,481 + -0.5 5,905,482 - -1.8 5,905,482 - -0.3 5,905,482 - -0.5 5,905,482 - -0.1 5,905,482 - -1.1 5,905,482 - -0.7 5,905,514 + -2.4 5,905,514 + +1.0 5,905,514 + +0.7 5,905,515 - -2.4 5,905,515 - -1.3 5,905,515 - +0.7 5,905,515 - -0.3 5,905,515 - -0.3 5,905,515 - -2.1 5,905,515 - +0.2 5,905,515 - -1.3 5,905,515 - -1.6 5,905,558 + AO353_26930 0.13 -0.8 5,905,559 - AO353_26930 0.13 +0.7 5,905,559 - AO353_26930 0.13 +0.2 5,905,559 - AO353_26930 0.13 -0.7 5,905,559 - AO353_26930 0.13 +0.2 5,905,617 + AO353_26930 0.19 -2.3 5,905,617 + AO353_26930 0.19 -1.8 5,905,623 + AO353_26930 0.20 -0.8 5,905,631 + AO353_26930 0.21 -1.6 5,905,631 + AO353_26930 0.21 +0.7 5,905,631 + AO353_26930 0.21 +0.2 5,905,631 + AO353_26930 0.21 -0.3 5,905,631 + AO353_26930 0.21 -1.6 5,905,632 - AO353_26930 0.21 -1.3 5,905,643 + AO353_26930 0.22 -1.3 5,905,643 + AO353_26930 0.22 +0.7 5,905,644 - AO353_26930 0.22 -1.5 5,905,644 - AO353_26930 0.22 +2.5 5,905,673 + AO353_26930 0.25 -0.8 5,905,673 + AO353_26930 0.25 +1.9 5,905,673 + AO353_26930 0.25 +0.7 5,905,674 - AO353_26930 0.25 +0.2 5,905,674 - AO353_26930 0.25 +1.7 5,905,785 - AO353_26930 0.37 -0.3 5,905,795 - AO353_26930 0.38 +0.7 5,905,842 - AO353_26930 0.43 +2.1 5,905,842 - AO353_26930 0.43 +0.7 5,905,842 - AO353_26930 0.43 -0.8 5,906,081 + AO353_26930 0.68 -1.6 5,906,081 + AO353_26930 0.68 +0.9 5,906,081 + AO353_26930 0.68 -1.3 5,906,081 + AO353_26930 0.68 +0.5 5,906,081 + AO353_26930 0.68 -0.1 5,906,082 - AO353_26930 0.68 +0.5 5,906,082 - AO353_26930 0.68 +0.7 5,906,093 + AO353_26930 0.70 -0.2 5,906,111 + AO353_26930 0.71 -0.8 5,906,111 + AO353_26930 0.71 +0.1 5,906,112 - AO353_26930 0.72 -1.4 5,906,199 + AO353_26930 0.81 +2.6 5,906,199 + AO353_26930 0.81 +1.0 5,906,200 - AO353_26930 0.81 -0.7 5,906,200 - AO353_26930 0.81 -0.3 5,906,200 - AO353_26930 0.81 -2.6 5,906,206 + AO353_26930 0.81 -1.1 5,906,206 + AO353_26930 0.81 +1.0 5,906,207 - AO353_26930 0.81 -1.3 5,906,251 + AO353_26930 0.86 -1.4 5,906,252 - AO353_26930 0.86 +0.9 5,906,333 + -2.8 5,906,407 + -1.1 5,906,407 + -2.3 5,906,407 + +0.6 5,906,408 - +0.5 5,906,408 - +2.1 5,906,408 - -2.4 5,906,408 - -0.8 5,906,408 - -2.1 5,906,408 - -0.8 5,906,411 + +0.9 5,906,412 - +0.7 5,906,444 - -0.8 5,906,453 - -1.4 5,906,801 - AO353_26935 0.39 +0.7 5,906,813 - AO353_26935 0.40 -1.6 5,906,970 + AO353_26935 0.58 -2.6 5,907,225 + AO353_26935 0.88 -2.1 5,907,225 + AO353_26935 0.88 -2.0 5,907,300 + -1.3 5,907,301 - -1.5 5,907,314 + -1.4 5,907,314 + +3.0 5,907,314 + +1.3 5,907,350 - -0.3 5,907,358 + -0.3 5,907,358 + +1.2 5,907,358 + -1.8 5,907,358 + +0.2 5,907,358 + -0.8 5,907,358 + -0.7 5,907,358 + -0.8 5,907,358 + +0.7 5,907,358 + -0.3 5,907,358 + -0.8 5,907,358 + -3.0 5,907,358 + -0.8 5,907,359 - -0.8 5,907,359 - -0.1 5,907,359 - -1.6 5,907,359 - -1.6 5,907,359 - -0.8 5,907,359 - -0.3 5,907,359 - -2.0 5,907,359 - +2.6 5,907,359 - -2.3 5,907,359 - +1.2 5,907,359 - -0.4 5,907,359 - +0.9 5,907,359 - -0.3 5,907,425 - +0.2 5,907,425 - +1.7 5,907,442 - -2.5 5,907,542 + -1.3 5,907,542 + +1.7 5,907,542 + -2.1 5,907,542 + +0.9 5,907,542 + -0.3 5,907,542 + -1.7 5,907,543 - +0.4 5,907,543 - -2.3 5,907,545 + -0.6 5,907,545 + -3.3 5,907,546 - +0.2 5,907,546 - -0.6 5,907,782 + AO353_26940 0.21 -1.6 5,907,782 + AO353_26940 0.21 -2.2 5,907,782 + AO353_26940 0.21 +2.8 5,907,782 + AO353_26940 0.21 -1.0 5,907,782 + AO353_26940 0.21 -3.2 5,907,782 + AO353_26940 0.21 +0.2 5,907,782 + AO353_26940 0.21 -0.5 5,907,782 + AO353_26940 0.21 -0.5 5,907,782 + AO353_26940 0.21 +0.8 5,907,782 + AO353_26940 0.21 -2.4 5,907,782 + AO353_26940 0.21 +1.0 5,907,782 + AO353_26940 0.21 -0.2 5,907,782 + AO353_26940 0.21 -0.6 5,907,782 + AO353_26940 0.21 +1.2 5,907,783 - AO353_26940 0.21 -1.0 5,907,783 - AO353_26940 0.21 +0.8 5,907,783 - AO353_26940 0.21 +0.8 5,907,783 - AO353_26940 0.21 -0.2 5,907,783 - AO353_26940 0.21 -1.0 5,907,783 - AO353_26940 0.21 +3.0 5,907,783 - AO353_26940 0.21 +0.9 5,907,783 - AO353_26940 0.21 +0.8 5,907,783 - AO353_26940 0.21 -0.9 5,907,783 - AO353_26940 0.21 +1.2 5,907,783 - AO353_26940 0.21 -1.6 5,907,783 - AO353_26940 0.21 -0.2 5,907,783 - AO353_26940 0.21 -1.1 5,907,783 - AO353_26940 0.21 -0.2 5,907,783 - AO353_26940 0.21 +1.8 5,907,783 - AO353_26940 0.21 +1.5 5,907,783 - AO353_26940 0.21 +1.8 5,907,783 - AO353_26940 0.21 -1.8 5,907,783 - AO353_26940 0.21 +0.8 5,907,783 - AO353_26940 0.21 +1.8 5,907,783 - AO353_26940 0.21 -2.2 5,907,783 - -1.2 5,907,783 - AO353_26940 0.21 -0.6 5,907,783 - AO353_26940 0.21 -0.7 5,907,784 + AO353_26940 0.21 -1.8 5,907,784 + AO353_26940 0.21 -2.2 5,907,784 + AO353_26940 0.21 -1.2 5,907,784 + AO353_26940 0.21 +0.2 5,907,784 + AO353_26940 0.21 -2.8 5,907,784 + AO353_26940 0.21 +1.8 5,907,784 + AO353_26940 0.21 -0.9 5,907,784 + AO353_26940 0.21 +1.1 5,907,785 - AO353_26940 0.21 +1.3 5,907,785 - AO353_26940 0.21 -0.4 5,907,785 - AO353_26940 0.21 -1.2 5,907,785 - AO353_26940 0.21 -0.8 5,907,785 - AO353_26940 0.21 +0.6 5,907,785 - AO353_26940 0.21 -1.2 5,907,785 - AO353_26940 0.21 +1.1 5,907,785 - AO353_26940 0.21 -0.2 5,907,785 - AO353_26940 0.21 +0.8 5,907,785 - AO353_26940 0.21 -0.2 5,907,785 - AO353_26940 0.21 +1.2 5,907,785 - AO353_26940 0.21 -1.2 5,907,785 - AO353_26940 0.21 -0.8 5,907,785 - AO353_26940 0.21 -0.1 5,907,785 - AO353_26940 0.21 +0.3 5,907,785 - AO353_26940 0.21 +0.0 5,907,785 - AO353_26940 0.21 +0.5 5,907,785 - AO353_26940 0.21 +0.3 5,907,797 + AO353_26940 0.22 -1.4 5,907,797 + AO353_26940 0.22 -0.8 5,907,797 + AO353_26940 0.22 -0.6 5,907,797 + AO353_26940 0.22 -1.6 5,907,798 - AO353_26940 0.22 -3.5 5,907,798 - AO353_26940 0.22 +2.3 5,907,808 + AO353_26940 0.22 -1.8 5,907,809 - AO353_26940 0.22 -1.0 5,907,809 - AO353_26940 0.22 +0.3 5,907,836 - AO353_26940 0.24 -0.9 5,907,901 + AO353_26940 0.28 +1.1 5,907,901 + AO353_26940 0.28 +0.8 5,907,992 + AO353_26940 0.34 +0.1 5,907,992 + AO353_26940 0.34 -1.4 5,907,992 + AO353_26940 0.34 +0.3 5,907,992 + AO353_26940 0.34 +1.3 5,907,993 - AO353_26940 0.34 -0.8 5,907,998 + AO353_26940 0.35 -1.6 5,907,999 - AO353_26940 0.35 -1.4 5,907,999 - AO353_26940 0.35 +0.2 5,908,022 + AO353_26940 0.36 +0.9 5,908,023 - AO353_26940 0.36 -1.8 5,908,023 - AO353_26940 0.36 +2.2 5,908,026 + AO353_26940 0.36 +2.3 5,908,026 + AO353_26940 0.36 +0.2 5,908,062 - AO353_26940 0.39 -1.2 5,908,100 - AO353_26940 0.41 +0.8 5,908,112 + AO353_26940 0.42 +1.5 5,908,112 + AO353_26940 0.42 -2.1 5,908,112 + AO353_26940 0.42 -0.2 5,908,147 + AO353_26940 0.44 +1.2 5,908,147 + AO353_26940 0.44 -0.0 5,908,148 - AO353_26940 0.44 +1.3 5,908,226 + AO353_26940 0.49 -0.2 5,908,294 + AO353_26940 0.54 +1.0 5,908,294 + AO353_26940 0.54 -0.0 5,908,294 + AO353_26940 0.54 -1.8 5,908,295 - AO353_26940 0.54 -1.6 5,908,295 - AO353_26940 0.54 -2.7 5,908,295 - AO353_26940 0.54 -0.8 5,908,295 - AO353_26940 0.54 -0.5 5,908,295 - AO353_26940 0.54 +0.0
Or see this region's nucleotide sequence