Experiment: methylglyoxal 0.009 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26420 and AO353_26425 overlap by 1 nucleotides AO353_26425 and AO353_26430 are separated by 81 nucleotides AO353_26430 and AO353_26435 are separated by 37 nucleotides AO353_26435 and AO353_26440 are separated by 171 nucleotides
AO353_26420: AO353_26420 - hypothetical protein, at 5,793,139 to 5,794,128
_26420
AO353_26425: AO353_26425 - exonuclease, at 5,794,128 to 5,794,790
_26425
AO353_26430: AO353_26430 - hypothetical protein, at 5,794,872 to 5,795,198
_26430
AO353_26435: AO353_26435 - hypothetical protein, at 5,795,236 to 5,795,817
_26435
AO353_26440: AO353_26440 - hypothetical protein, at 5,795,989 to 5,796,306
_26440
Position (kb) 5794
5795
5796 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5793.874 kb on - strand, within AO353_26420 at 5793.971 kb on - strand, within AO353_26420 at 5793.971 kb on - strand, within AO353_26420 at 5794.000 kb on - strand, within AO353_26420 at 5794.075 kb on - strand at 5794.126 kb on + strand at 5794.200 kb on - strand, within AO353_26425 at 5794.250 kb on + strand, within AO353_26425 at 5794.250 kb on + strand, within AO353_26425 at 5794.269 kb on + strand at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.269 kb on + strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.270 kb on - strand, within AO353_26425 at 5794.336 kb on + strand, within AO353_26425 at 5794.377 kb on + strand, within AO353_26425 at 5794.434 kb on + strand, within AO353_26425 at 5794.435 kb on - strand, within AO353_26425 at 5794.435 kb on - strand, within AO353_26425 at 5794.516 kb on + strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.517 kb on - strand, within AO353_26425 at 5794.541 kb on + strand, within AO353_26425 at 5794.541 kb on + strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.542 kb on - strand, within AO353_26425 at 5794.650 kb on + strand, within AO353_26425 at 5794.650 kb on + strand, within AO353_26425 at 5794.680 kb on + strand, within AO353_26425 at 5794.680 kb on + strand, within AO353_26425 at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.857 kb on + strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.858 kb on - strand at 5794.926 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.014 kb on + strand, within AO353_26430 at 5795.015 kb on - strand, within AO353_26430 at 5795.063 kb on + strand, within AO353_26430 at 5795.064 kb on - strand, within AO353_26430 at 5795.073 kb on + strand, within AO353_26430 at 5795.074 kb on - strand at 5795.074 kb on - strand, within AO353_26430 at 5795.074 kb on - strand, within AO353_26430 at 5795.111 kb on + strand, within AO353_26430 at 5795.129 kb on + strand, within AO353_26430 at 5795.129 kb on + strand, within AO353_26430 at 5795.204 kb on + strand at 5795.204 kb on + strand at 5795.204 kb on + strand at 5795.205 kb on - strand at 5795.205 kb on - strand at 5795.205 kb on - strand at 5795.211 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.224 kb on + strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.225 kb on - strand at 5795.237 kb on + strand at 5795.237 kb on + strand at 5795.238 kb on - strand at 5795.242 kb on - strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.279 kb on + strand at 5795.280 kb on - strand at 5795.280 kb on - strand at 5795.281 kb on + strand at 5795.281 kb on + strand at 5795.281 kb on + strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.282 kb on - strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.285 kb on + strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.286 kb on - strand at 5795.294 kb on + strand at 5795.295 kb on - strand, within AO353_26435 at 5795.297 kb on + strand, within AO353_26435 at 5795.298 kb on - strand, within AO353_26435 at 5795.298 kb on - strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.333 kb on + strand, within AO353_26435 at 5795.334 kb on - strand, within AO353_26435 at 5795.359 kb on + strand, within AO353_26435 at 5795.359 kb on + strand, within AO353_26435 at 5795.360 kb on - strand, within AO353_26435 at 5795.365 kb on - strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.400 kb on + strand, within AO353_26435 at 5795.401 kb on - strand, within AO353_26435 at 5795.410 kb on - strand, within AO353_26435 at 5795.434 kb on - strand, within AO353_26435 at 5795.469 kb on + strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.470 kb on - strand, within AO353_26435 at 5795.514 kb on + strand, within AO353_26435 at 5795.514 kb on + strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.515 kb on - strand, within AO353_26435 at 5795.563 kb on + strand, within AO353_26435 at 5795.564 kb on - strand, within AO353_26435 at 5795.582 kb on - strand, within AO353_26435 at 5795.582 kb on - strand at 5795.582 kb on - strand, within AO353_26435 at 5795.588 kb on - strand, within AO353_26435 at 5795.632 kb on + strand at 5795.632 kb on + strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.633 kb on - strand, within AO353_26435 at 5795.635 kb on + strand, within AO353_26435 at 5795.636 kb on - strand, within AO353_26435 at 5795.648 kb on - strand, within AO353_26435 at 5795.738 kb on - strand, within AO353_26435 at 5795.764 kb on - strand at 5795.860 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.940 kb on + strand at 5795.940 kb on + strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.998 kb on + strand at 5795.998 kb on + strand at 5795.999 kb on - strand at 5795.999 kb on - strand at 5796.128 kb on - strand, within AO353_26440 at 5796.139 kb on + strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.150 kb on + strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.154 kb on + strand, within AO353_26440
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.009 vol% remove 5,793,874 - AO353_26420 0.74 -1.2 5,793,971 - AO353_26420 0.84 -0.7 5,793,971 - AO353_26420 0.84 -0.6 5,794,000 - AO353_26420 0.87 -0.8 5,794,075 - -1.8 5,794,126 + +0.8 5,794,200 - AO353_26425 0.11 +0.3 5,794,250 + AO353_26425 0.18 +1.3 5,794,250 + AO353_26425 0.18 +1.6 5,794,269 + -0.8 5,794,269 + AO353_26425 0.21 +3.1 5,794,269 + AO353_26425 0.21 -2.0 5,794,269 + AO353_26425 0.21 +1.3 5,794,269 + AO353_26425 0.21 -1.2 5,794,269 + AO353_26425 0.21 -1.2 5,794,269 + AO353_26425 0.21 -2.0 5,794,269 + AO353_26425 0.21 -0.7 5,794,269 + AO353_26425 0.21 -0.2 5,794,269 + AO353_26425 0.21 -1.2 5,794,269 + AO353_26425 0.21 +0.2 5,794,269 + AO353_26425 0.21 -2.4 5,794,269 + AO353_26425 0.21 -2.0 5,794,269 + AO353_26425 0.21 -0.8 5,794,270 - AO353_26425 0.21 +1.2 5,794,270 - AO353_26425 0.21 -0.8 5,794,270 - AO353_26425 0.21 -0.8 5,794,270 - AO353_26425 0.21 +2.1 5,794,270 - AO353_26425 0.21 -0.2 5,794,336 + AO353_26425 0.31 -1.0 5,794,377 + AO353_26425 0.38 -0.8 5,794,434 + AO353_26425 0.46 +0.0 5,794,435 - AO353_26425 0.46 -1.0 5,794,435 - AO353_26425 0.46 +1.0 5,794,516 + AO353_26425 0.59 -2.9 5,794,517 - AO353_26425 0.59 +1.5 5,794,517 - AO353_26425 0.59 +0.0 5,794,517 - AO353_26425 0.59 +1.1 5,794,517 - AO353_26425 0.59 -1.1 5,794,517 - AO353_26425 0.59 +0.6 5,794,541 + AO353_26425 0.62 -1.5 5,794,541 + AO353_26425 0.62 +2.5 5,794,542 - AO353_26425 0.62 -0.8 5,794,542 - AO353_26425 0.62 +0.2 5,794,542 - AO353_26425 0.62 +0.4 5,794,542 - AO353_26425 0.62 -1.6 5,794,650 + AO353_26425 0.79 +2.3 5,794,650 + AO353_26425 0.79 -1.8 5,794,680 + AO353_26425 0.83 +0.9 5,794,680 + AO353_26425 0.83 -0.4 5,794,857 + -2.0 5,794,857 + -0.2 5,794,857 + -1.8 5,794,857 + -1.8 5,794,857 + +1.3 5,794,857 + -1.0 5,794,857 + -0.4 5,794,857 + +0.3 5,794,857 + -0.5 5,794,858 - +3.3 5,794,858 - -1.2 5,794,858 - -0.8 5,794,858 - +1.8 5,794,858 - -1.6 5,794,858 - +0.8 5,794,858 - -1.8 5,794,926 + AO353_26430 0.17 -0.6 5,795,014 + AO353_26430 0.43 -0.2 5,795,014 + AO353_26430 0.43 -0.8 5,795,014 + AO353_26430 0.43 -2.6 5,795,014 + AO353_26430 0.43 -1.0 5,795,014 + AO353_26430 0.43 -1.1 5,795,015 - AO353_26430 0.44 +0.3 5,795,063 + AO353_26430 0.58 -0.4 5,795,064 - AO353_26430 0.59 -1.8 5,795,073 + AO353_26430 0.61 -0.6 5,795,074 - +1.4 5,795,074 - AO353_26430 0.62 -0.3 5,795,074 - AO353_26430 0.62 -0.7 5,795,111 + AO353_26430 0.73 -2.4 5,795,129 + AO353_26430 0.79 -0.8 5,795,129 + AO353_26430 0.79 -2.7 5,795,204 + +0.6 5,795,204 + +0.2 5,795,204 + -1.6 5,795,205 - -0.2 5,795,205 - +1.8 5,795,205 - -0.2 5,795,211 + -0.8 5,795,224 + +1.8 5,795,224 + -1.2 5,795,224 + -0.7 5,795,224 + -0.7 5,795,225 - -3.4 5,795,225 - +0.1 5,795,225 - -0.2 5,795,225 - -0.5 5,795,237 + -0.8 5,795,237 + +1.8 5,795,238 - +1.6 5,795,242 - +0.3 5,795,279 + -0.4 5,795,279 + +0.9 5,795,279 + +1.0 5,795,279 + +2.3 5,795,280 - +0.9 5,795,280 - -0.2 5,795,281 + +1.3 5,795,281 + +0.8 5,795,281 + +0.6 5,795,282 - +0.9 5,795,282 - +3.6 5,795,282 - +1.3 5,795,282 - -0.2 5,795,282 - +0.3 5,795,282 - -1.2 5,795,285 + -1.2 5,795,285 + -1.6 5,795,285 + -1.0 5,795,285 + -1.0 5,795,286 - +0.2 5,795,286 - -0.2 5,795,286 - -0.0 5,795,286 - -0.1 5,795,286 - +0.2 5,795,294 + -0.3 5,795,295 - AO353_26435 0.10 +1.6 5,795,297 + AO353_26435 0.10 -1.6 5,795,298 - AO353_26435 0.11 -1.2 5,795,298 - AO353_26435 0.11 +0.8 5,795,333 + AO353_26435 0.17 +1.2 5,795,333 + AO353_26435 0.17 +0.0 5,795,333 + AO353_26435 0.17 -1.6 5,795,333 + AO353_26435 0.17 -0.0 5,795,334 - AO353_26435 0.17 +1.5 5,795,359 + AO353_26435 0.21 -0.2 5,795,359 + AO353_26435 0.21 -0.2 5,795,360 - AO353_26435 0.21 -1.8 5,795,365 - AO353_26435 0.22 +1.8 5,795,400 + AO353_26435 0.28 +2.8 5,795,400 + AO353_26435 0.28 -0.2 5,795,400 + AO353_26435 0.28 -0.4 5,795,401 - AO353_26435 0.28 +0.6 5,795,410 - AO353_26435 0.30 -1.6 5,795,434 - AO353_26435 0.34 +0.0 5,795,469 + AO353_26435 0.40 +0.8 5,795,470 - AO353_26435 0.40 +0.8 5,795,470 - AO353_26435 0.40 +0.6 5,795,470 - AO353_26435 0.40 +1.4 5,795,470 - AO353_26435 0.40 -2.2 5,795,514 + AO353_26435 0.48 -1.6 5,795,514 + AO353_26435 0.48 -1.2 5,795,515 - AO353_26435 0.48 +0.5 5,795,515 - AO353_26435 0.48 -0.5 5,795,515 - AO353_26435 0.48 +1.8 5,795,515 - AO353_26435 0.48 +0.6 5,795,563 + AO353_26435 0.56 -1.6 5,795,564 - AO353_26435 0.56 -0.7 5,795,582 - AO353_26435 0.59 +0.1 5,795,582 - +0.2 5,795,582 - AO353_26435 0.59 +2.3 5,795,588 - AO353_26435 0.60 -1.1 5,795,632 + -1.2 5,795,632 + AO353_26435 0.68 +0.8 5,795,633 - AO353_26435 0.68 +0.4 5,795,633 - AO353_26435 0.68 +1.8 5,795,633 - AO353_26435 0.68 -2.0 5,795,633 - AO353_26435 0.68 +1.5 5,795,633 - AO353_26435 0.68 +1.0 5,795,633 - AO353_26435 0.68 -0.2 5,795,635 + AO353_26435 0.69 +0.1 5,795,636 - AO353_26435 0.69 +0.5 5,795,648 - AO353_26435 0.71 -2.0 5,795,738 - AO353_26435 0.86 +0.8 5,795,764 - -1.6 5,795,860 + -1.2 5,795,902 + -0.2 5,795,902 + +0.1 5,795,902 + +1.3 5,795,940 + -0.2 5,795,940 + +1.6 5,795,941 - -0.2 5,795,941 - -0.5 5,795,941 - -0.2 5,795,941 - -0.4 5,795,998 + +1.1 5,795,998 + -1.2 5,795,999 - +1.4 5,795,999 - +2.1 5,796,128 - AO353_26440 0.44 +2.3 5,796,139 + AO353_26440 0.47 -0.2 5,796,140 - AO353_26440 0.47 -2.4 5,796,140 - AO353_26440 0.47 -2.3 5,796,140 - AO353_26440 0.47 +0.2 5,796,150 + AO353_26440 0.51 -0.4 5,796,151 - AO353_26440 0.51 -0.2 5,796,151 - AO353_26440 0.51 -2.0 5,796,151 - AO353_26440 0.51 -0.6 5,796,154 + AO353_26440 0.52 +0.3
Or see this region's nucleotide sequence