Experiment: methylglyoxal 0.009 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22505 and AO353_22510 are separated by 400 nucleotides AO353_22510 and AO353_22515 are separated by 125 nucleotides
AO353_22505: AO353_22505 - hypothetical protein, at 4,936,683 to 4,937,039
_22505
AO353_22510: AO353_22510 - hypothetical protein, at 4,937,440 to 4,937,631
_22510
AO353_22515: AO353_22515 - poly-gamma-glutamate biosynthesis protein, at 4,937,757 to 4,938,869
_22515
Position (kb)
4937
4938 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4936.563 kb on - strand at 4936.573 kb on + strand at 4936.574 kb on - strand at 4936.580 kb on + strand at 4936.656 kb on - strand at 4936.684 kb on + strand at 4936.685 kb on - strand at 4936.685 kb on - strand at 4936.714 kb on + strand at 4936.714 kb on + strand at 4936.715 kb on - strand at 4936.715 kb on - strand at 4936.715 kb on - strand at 4936.715 kb on - strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.718 kb on + strand at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.719 kb on - strand, within AO353_22505 at 4936.725 kb on - strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.768 kb on + strand, within AO353_22505 at 4936.769 kb on - strand, within AO353_22505 at 4936.769 kb on - strand, within AO353_22505 at 4936.776 kb on + strand, within AO353_22505 at 4936.776 kb on + strand, within AO353_22505 at 4936.777 kb on - strand, within AO353_22505 at 4936.797 kb on + strand, within AO353_22505 at 4936.797 kb on + strand, within AO353_22505 at 4936.797 kb on + strand, within AO353_22505 at 4936.797 kb on + strand, within AO353_22505 at 4936.797 kb on + strand, within AO353_22505 at 4936.798 kb on - strand, within AO353_22505 at 4936.798 kb on - strand, within AO353_22505 at 4936.798 kb on - strand, within AO353_22505 at 4936.800 kb on + strand, within AO353_22505 at 4936.801 kb on - strand, within AO353_22505 at 4936.801 kb on - strand, within AO353_22505 at 4936.801 kb on - strand, within AO353_22505 at 4936.830 kb on + strand, within AO353_22505 at 4936.935 kb on + strand, within AO353_22505 at 4936.935 kb on + strand, within AO353_22505 at 4937.053 kb on + strand at 4937.054 kb on - strand at 4937.054 kb on - strand at 4937.054 kb on - strand at 4937.054 kb on - strand at 4937.078 kb on - strand at 4937.209 kb on + strand at 4937.209 kb on + strand at 4937.209 kb on + strand at 4937.209 kb on + strand at 4937.254 kb on + strand at 4937.254 kb on + strand at 4937.254 kb on + strand at 4937.254 kb on + strand at 4937.257 kb on + strand at 4937.257 kb on + strand at 4937.427 kb on + strand at 4937.428 kb on - strand at 4937.428 kb on - strand at 4937.500 kb on - strand, within AO353_22510 at 4937.598 kb on + strand, within AO353_22510 at 4937.598 kb on + strand, within AO353_22510 at 4937.599 kb on - strand, within AO353_22510 at 4937.599 kb on - strand, within AO353_22510 at 4937.599 kb on - strand, within AO353_22510 at 4937.610 kb on + strand, within AO353_22510 at 4937.610 kb on + strand, within AO353_22510 at 4937.610 kb on + strand, within AO353_22510 at 4937.611 kb on - strand, within AO353_22510 at 4937.646 kb on + strand at 4937.647 kb on - strand at 4937.677 kb on + strand at 4937.701 kb on + strand at 4937.701 kb on + strand at 4937.713 kb on + strand at 4937.758 kb on + strand at 4937.951 kb on - strand, within AO353_22515 at 4937.951 kb on - strand, within AO353_22515 at 4937.951 kb on - strand, within AO353_22515 at 4938.002 kb on - strand, within AO353_22515 at 4938.028 kb on + strand, within AO353_22515 at 4938.432 kb on - strand, within AO353_22515
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.009 vol% remove 4,936,563 - +0.0 4,936,573 + -0.2 4,936,574 - +1.2 4,936,580 + -0.8 4,936,656 - -1.9 4,936,684 + -0.8 4,936,685 - -0.2 4,936,685 - +0.0 4,936,714 + +1.6 4,936,714 + +0.5 4,936,715 - +1.2 4,936,715 - -2.4 4,936,715 - -2.5 4,936,715 - +3.9 4,936,718 + -1.5 4,936,718 + +0.3 4,936,718 + +3.8 4,936,718 + -0.1 4,936,718 + -1.5 4,936,718 + -0.2 4,936,718 + +2.8 4,936,719 - AO353_22505 0.10 +1.5 4,936,719 - AO353_22505 0.10 +0.6 4,936,719 - AO353_22505 0.10 -0.8 4,936,719 - AO353_22505 0.10 +0.5 4,936,719 - AO353_22505 0.10 +1.5 4,936,719 - AO353_22505 0.10 -2.4 4,936,719 - AO353_22505 0.10 -2.2 4,936,719 - AO353_22505 0.10 +1.2 4,936,719 - AO353_22505 0.10 +1.5 4,936,725 - AO353_22505 0.12 -1.0 4,936,768 + AO353_22505 0.24 -2.5 4,936,768 + AO353_22505 0.24 +0.1 4,936,768 + AO353_22505 0.24 +0.8 4,936,768 + AO353_22505 0.24 -0.2 4,936,768 + AO353_22505 0.24 +0.1 4,936,768 + AO353_22505 0.24 +0.8 4,936,769 - AO353_22505 0.24 -2.0 4,936,769 - AO353_22505 0.24 -1.8 4,936,776 + AO353_22505 0.26 -0.6 4,936,776 + AO353_22505 0.26 +3.5 4,936,777 - AO353_22505 0.26 +1.1 4,936,797 + AO353_22505 0.32 -2.2 4,936,797 + AO353_22505 0.32 -1.0 4,936,797 + AO353_22505 0.32 -0.2 4,936,797 + AO353_22505 0.32 -1.8 4,936,797 + AO353_22505 0.32 -0.0 4,936,798 - AO353_22505 0.32 -1.5 4,936,798 - AO353_22505 0.32 +1.8 4,936,798 - AO353_22505 0.32 -1.1 4,936,800 + AO353_22505 0.33 +0.0 4,936,801 - AO353_22505 0.33 -2.5 4,936,801 - AO353_22505 0.33 +1.4 4,936,801 - AO353_22505 0.33 -1.5 4,936,830 + AO353_22505 0.41 +1.2 4,936,935 + AO353_22505 0.71 -1.3 4,936,935 + AO353_22505 0.71 +0.1 4,937,053 + -0.6 4,937,054 - -1.8 4,937,054 - -1.5 4,937,054 - +0.3 4,937,054 - -0.2 4,937,078 - -0.9 4,937,209 + -0.8 4,937,209 + -2.8 4,937,209 + -1.0 4,937,209 + +0.8 4,937,254 + -1.7 4,937,254 + -0.5 4,937,254 + +1.5 4,937,254 + -0.8 4,937,257 + +0.0 4,937,257 + +1.1 4,937,427 + -1.2 4,937,428 - -0.8 4,937,428 - +2.4 4,937,500 - AO353_22510 0.31 -1.8 4,937,598 + AO353_22510 0.82 -1.4 4,937,598 + AO353_22510 0.82 +1.4 4,937,599 - AO353_22510 0.83 -0.2 4,937,599 - AO353_22510 0.83 +1.0 4,937,599 - AO353_22510 0.83 +3.7 4,937,610 + AO353_22510 0.89 -0.1 4,937,610 + AO353_22510 0.89 -1.8 4,937,610 + AO353_22510 0.89 +0.8 4,937,611 - AO353_22510 0.89 +2.4 4,937,646 + -1.8 4,937,647 - -0.4 4,937,677 + -0.4 4,937,701 + +0.8 4,937,701 + -2.5 4,937,713 + -0.5 4,937,758 + -1.2 4,937,951 - AO353_22515 0.17 -1.5 4,937,951 - AO353_22515 0.17 +2.0 4,937,951 - AO353_22515 0.17 +1.6 4,938,002 - AO353_22515 0.22 -0.2 4,938,028 + AO353_22515 0.24 -2.7 4,938,432 - AO353_22515 0.61 -1.7
Or see this region's nucleotide sequence