Experiment: methylglyoxal 0.009 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21665 and AO353_21670 are separated by 119 nucleotides AO353_21670 and AO353_21675 are separated by 58 nucleotides AO353_21675 and AO353_21680 are separated by 134 nucleotides
AO353_21665: AO353_21665 - magnesium chelatase, at 4,751,414 to 4,752,421
_21665
AO353_21670: AO353_21670 - magnesium chelatase, at 4,752,541 to 4,753,077
_21670
AO353_21675: AO353_21675 - phospholipase, at 4,753,136 to 4,754,779
_21675
AO353_21680: AO353_21680 - hypothetical protein, at 4,754,914 to 4,756,473
_21680
Position (kb)
4753
4754
4755 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4752.373 kb on - strand at 4752.373 kb on - strand at 4752.420 kb on - strand at 4753.054 kb on + strand at 4753.062 kb on + strand at 4753.063 kb on - strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.075 kb on + strand at 4753.076 kb on - strand at 4753.088 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.101 kb on + strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.102 kb on - strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.184 kb on + strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.185 kb on - strand at 4753.207 kb on - strand at 4753.207 kb on - strand at 4753.344 kb on - strand, within AO353_21675 at 4753.344 kb on - strand, within AO353_21675 at 4753.344 kb on - strand, within AO353_21675 at 4753.427 kb on + strand, within AO353_21675 at 4753.428 kb on - strand, within AO353_21675 at 4753.428 kb on - strand, within AO353_21675 at 4753.445 kb on + strand, within AO353_21675 at 4753.446 kb on - strand, within AO353_21675 at 4753.736 kb on + strand, within AO353_21675 at 4753.737 kb on - strand, within AO353_21675 at 4753.811 kb on + strand, within AO353_21675 at 4753.811 kb on + strand, within AO353_21675 at 4753.812 kb on - strand, within AO353_21675 at 4753.812 kb on - strand, within AO353_21675 at 4753.812 kb on - strand, within AO353_21675 at 4754.010 kb on - strand, within AO353_21675 at 4754.044 kb on + strand, within AO353_21675 at 4754.044 kb on + strand, within AO353_21675 at 4754.113 kb on + strand, within AO353_21675 at 4754.113 kb on + strand, within AO353_21675 at 4754.634 kb on - strand at 4754.634 kb on - strand at 4754.634 kb on - strand at 4754.655 kb on - strand at 4754.723 kb on + strand at 4754.723 kb on + strand at 4754.723 kb on + strand at 4754.723 kb on + strand at 4754.723 kb on + strand at 4754.724 kb on - strand at 4754.726 kb on + strand at 4754.726 kb on + strand at 4754.727 kb on - strand at 4754.727 kb on - strand at 4754.727 kb on - strand at 4754.777 kb on + strand at 4754.855 kb on + strand at 4754.856 kb on - strand at 4754.856 kb on - strand at 4754.856 kb on - strand at 4754.856 kb on - strand at 4754.856 kb on - strand at 4754.910 kb on + strand at 4754.911 kb on - strand at 4754.911 kb on - strand at 4754.911 kb on - strand at 4754.911 kb on - strand at 4754.924 kb on + strand at 4754.924 kb on + strand at 4754.924 kb on + strand at 4754.925 kb on - strand at 4754.925 kb on - strand at 4754.925 kb on - strand at 4754.936 kb on + strand at 4754.936 kb on + strand at 4754.936 kb on + strand at 4754.936 kb on + strand at 4754.937 kb on - strand at 4754.937 kb on - strand at 4754.937 kb on - strand at 4754.937 kb on - strand at 4754.937 kb on - strand at 4754.977 kb on + strand at 4754.978 kb on - strand at 4755.063 kb on + strand at 4755.136 kb on + strand, within AO353_21680 at 4755.136 kb on + strand, within AO353_21680 at 4755.137 kb on - strand, within AO353_21680 at 4755.167 kb on - strand, within AO353_21680 at 4755.191 kb on - strand, within AO353_21680 at 4755.225 kb on + strand, within AO353_21680 at 4755.274 kb on + strand, within AO353_21680 at 4755.275 kb on - strand, within AO353_21680 at 4755.275 kb on - strand, within AO353_21680 at 4755.359 kb on + strand, within AO353_21680 at 4755.359 kb on + strand, within AO353_21680 at 4755.360 kb on - strand, within AO353_21680 at 4755.360 kb on - strand, within AO353_21680 at 4755.511 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.553 kb on + strand, within AO353_21680 at 4755.554 kb on - strand, within AO353_21680 at 4755.554 kb on - strand, within AO353_21680 at 4755.554 kb on - strand, within AO353_21680 at 4755.554 kb on - strand, within AO353_21680
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.009 vol% remove 4,752,373 - +2.5 4,752,373 - -1.0 4,752,420 - -2.0 4,753,054 + +1.2 4,753,062 + -1.8 4,753,063 - +2.1 4,753,075 + +0.4 4,753,075 + -1.4 4,753,075 + -0.2 4,753,075 + +1.3 4,753,075 + +1.0 4,753,076 - -0.1 4,753,088 + -0.2 4,753,101 + +1.4 4,753,101 + +1.1 4,753,101 + -1.6 4,753,101 + -1.2 4,753,101 + -0.0 4,753,102 - -2.0 4,753,102 - -0.8 4,753,102 - +0.4 4,753,102 - +0.4 4,753,102 - -1.1 4,753,102 - -0.8 4,753,102 - +0.0 4,753,102 - +0.4 4,753,102 - -1.0 4,753,102 - -3.3 4,753,102 - +0.5 4,753,102 - -1.1 4,753,184 + -0.2 4,753,184 + -0.2 4,753,184 + -1.9 4,753,184 + +0.9 4,753,185 - -0.6 4,753,185 - +1.0 4,753,185 - +0.6 4,753,185 - -1.3 4,753,185 - -0.8 4,753,207 - -0.6 4,753,207 - +1.0 4,753,344 - AO353_21675 0.13 -0.1 4,753,344 - AO353_21675 0.13 -1.7 4,753,344 - AO353_21675 0.13 +1.2 4,753,427 + AO353_21675 0.18 +2.4 4,753,428 - AO353_21675 0.18 -2.7 4,753,428 - AO353_21675 0.18 -0.6 4,753,445 + AO353_21675 0.19 +1.9 4,753,446 - AO353_21675 0.19 -0.5 4,753,736 + AO353_21675 0.36 -0.5 4,753,737 - AO353_21675 0.37 +0.3 4,753,811 + AO353_21675 0.41 -0.2 4,753,811 + AO353_21675 0.41 -0.5 4,753,812 - AO353_21675 0.41 +0.1 4,753,812 - AO353_21675 0.41 +0.0 4,753,812 - AO353_21675 0.41 -1.2 4,754,010 - AO353_21675 0.53 -1.8 4,754,044 + AO353_21675 0.55 +0.8 4,754,044 + AO353_21675 0.55 -1.8 4,754,113 + AO353_21675 0.59 +0.8 4,754,113 + AO353_21675 0.59 -0.6 4,754,634 - +0.8 4,754,634 - -1.9 4,754,634 - -0.5 4,754,655 - +0.4 4,754,723 + +0.3 4,754,723 + +1.8 4,754,723 + -3.0 4,754,723 + -0.8 4,754,723 + +0.8 4,754,724 - -1.4 4,754,726 + -1.2 4,754,726 + +0.8 4,754,727 - -0.2 4,754,727 - +0.3 4,754,727 - -0.2 4,754,777 + +0.5 4,754,855 + -1.2 4,754,856 - -2.0 4,754,856 - -1.0 4,754,856 - -0.2 4,754,856 - -0.1 4,754,856 - -4.2 4,754,910 + -2.5 4,754,911 - -0.3 4,754,911 - +0.3 4,754,911 - -2.0 4,754,911 - +0.8 4,754,924 + -0.6 4,754,924 + -0.8 4,754,924 + +0.2 4,754,925 - -2.0 4,754,925 - -1.0 4,754,925 - +1.0 4,754,936 + -0.8 4,754,936 + +0.9 4,754,936 + +1.2 4,754,936 + -2.0 4,754,937 - -1.6 4,754,937 - +2.3 4,754,937 - +1.6 4,754,937 - -2.0 4,754,937 - -1.8 4,754,977 + +0.1 4,754,978 - -1.0 4,755,063 + +0.4 4,755,136 + AO353_21680 0.14 -0.8 4,755,136 + AO353_21680 0.14 -2.4 4,755,137 - AO353_21680 0.14 -0.8 4,755,167 - AO353_21680 0.16 -0.5 4,755,191 - AO353_21680 0.18 -2.2 4,755,225 + AO353_21680 0.20 -0.0 4,755,274 + AO353_21680 0.23 -0.2 4,755,275 - AO353_21680 0.23 +1.8 4,755,275 - AO353_21680 0.23 -0.3 4,755,359 + AO353_21680 0.29 -0.2 4,755,359 + AO353_21680 0.29 -0.2 4,755,360 - AO353_21680 0.29 +1.9 4,755,360 - AO353_21680 0.29 -0.6 4,755,511 + AO353_21680 0.38 -0.5 4,755,553 + AO353_21680 0.41 +0.5 4,755,553 + AO353_21680 0.41 -2.0 4,755,553 + AO353_21680 0.41 -0.0 4,755,553 + AO353_21680 0.41 +0.4 4,755,553 + AO353_21680 0.41 +1.8 4,755,553 + AO353_21680 0.41 +1.8 4,755,553 + AO353_21680 0.41 -1.6 4,755,553 + AO353_21680 0.41 +0.9 4,755,554 - AO353_21680 0.41 -0.6 4,755,554 - AO353_21680 0.41 +0.5 4,755,554 - AO353_21680 0.41 -1.0 4,755,554 - AO353_21680 0.41 -0.4
Or see this region's nucleotide sequence