Experiment: methylglyoxal 0.009 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19730 and AO353_19735 are separated by 698 nucleotides AO353_19735 and AO353_19740 are separated by 92 nucleotides
AO353_19730: AO353_19730 - filamentous hemagglutinin, at 4,333,035 to 4,337,813
_19730
AO353_19735: AO353_19735 - hypothetical protein, at 4,338,512 to 4,339,294
_19735
AO353_19740: AO353_19740 - MFS transporter, at 4,339,387 to 4,340,538
_19740
Position (kb)
4338
4339
4340 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4337.767 kb on - strand at 4337.767 kb on - strand at 4337.767 kb on - strand at 4337.767 kb on - strand at 4337.812 kb on - strand at 4338.041 kb on - strand at 4338.236 kb on - strand at 4338.342 kb on + strand at 4338.343 kb on - strand at 4338.348 kb on + strand at 4338.349 kb on - strand at 4338.349 kb on - strand at 4338.349 kb on - strand at 4338.390 kb on - strand at 4338.420 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.449 kb on + strand at 4338.450 kb on - strand at 4338.450 kb on - strand at 4338.473 kb on + strand at 4338.473 kb on + strand at 4338.473 kb on + strand at 4338.473 kb on + strand at 4338.473 kb on + strand at 4338.473 kb on + strand at 4338.474 kb on - strand at 4338.677 kb on + strand, within AO353_19735 at 4338.677 kb on + strand, within AO353_19735 at 4338.677 kb on + strand, within AO353_19735 at 4338.677 kb on + strand, within AO353_19735 at 4338.678 kb on - strand, within AO353_19735 at 4338.678 kb on - strand, within AO353_19735 at 4338.678 kb on - strand, within AO353_19735 at 4338.678 kb on - strand, within AO353_19735 at 4338.734 kb on + strand, within AO353_19735 at 4339.004 kb on + strand, within AO353_19735 at 4339.004 kb on + strand, within AO353_19735 at 4339.004 kb on + strand, within AO353_19735 at 4339.004 kb on + strand, within AO353_19735 at 4339.004 kb on + strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.005 kb on - strand, within AO353_19735 at 4339.058 kb on + strand, within AO353_19735 at 4339.058 kb on + strand, within AO353_19735 at 4339.059 kb on - strand at 4339.059 kb on - strand, within AO353_19735 at 4339.109 kb on + strand, within AO353_19735 at 4339.293 kb on - strand at 4339.380 kb on + strand at 4339.380 kb on + strand at 4339.381 kb on - strand at 4339.381 kb on - strand at 4339.480 kb on - strand at 4339.517 kb on + strand, within AO353_19740 at 4339.517 kb on + strand, within AO353_19740 at 4339.586 kb on + strand, within AO353_19740 at 4339.587 kb on - strand, within AO353_19740 at 4339.587 kb on - strand, within AO353_19740 at 4339.734 kb on + strand, within AO353_19740 at 4339.734 kb on + strand, within AO353_19740 at 4339.735 kb on - strand, within AO353_19740 at 4339.735 kb on - strand, within AO353_19740 at 4339.735 kb on - strand, within AO353_19740 at 4339.794 kb on - strand, within AO353_19740 at 4339.809 kb on - strand, within AO353_19740 at 4339.887 kb on + strand, within AO353_19740 at 4339.962 kb on - strand, within AO353_19740 at 4339.962 kb on - strand, within AO353_19740 at 4340.168 kb on - strand, within AO353_19740
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.009 vol% remove 4,337,767 - -1.8 4,337,767 - -1.6 4,337,767 - +0.5 4,337,767 - +2.1 4,337,812 - -0.9 4,338,041 - -1.5 4,338,236 - -1.5 4,338,342 + -1.5 4,338,343 - +0.3 4,338,348 + +1.1 4,338,349 - -0.0 4,338,349 - -2.2 4,338,349 - -0.0 4,338,390 - +0.7 4,338,420 + -1.3 4,338,449 + -1.6 4,338,449 + -1.2 4,338,449 + +0.2 4,338,449 + +1.4 4,338,449 + +1.6 4,338,449 + -1.2 4,338,449 + -1.5 4,338,449 + -1.5 4,338,450 - -0.6 4,338,450 - +0.1 4,338,473 + +0.1 4,338,473 + -0.5 4,338,473 + -0.2 4,338,473 + -2.5 4,338,473 + +0.5 4,338,473 + -1.5 4,338,474 - +1.0 4,338,677 + AO353_19735 0.21 +1.0 4,338,677 + AO353_19735 0.21 +0.1 4,338,677 + AO353_19735 0.21 +1.1 4,338,677 + AO353_19735 0.21 +2.7 4,338,678 - AO353_19735 0.21 -1.3 4,338,678 - AO353_19735 0.21 -0.8 4,338,678 - AO353_19735 0.21 +1.1 4,338,678 - AO353_19735 0.21 -1.0 4,338,734 + AO353_19735 0.28 +0.5 4,339,004 + AO353_19735 0.63 +0.0 4,339,004 + AO353_19735 0.63 -0.2 4,339,004 + AO353_19735 0.63 +0.6 4,339,004 + AO353_19735 0.63 +0.4 4,339,004 + AO353_19735 0.63 +1.0 4,339,005 - AO353_19735 0.63 -0.2 4,339,005 - AO353_19735 0.63 +0.5 4,339,005 - AO353_19735 0.63 +0.8 4,339,005 - AO353_19735 0.63 +1.7 4,339,005 - AO353_19735 0.63 -2.5 4,339,005 - AO353_19735 0.63 -1.8 4,339,058 + AO353_19735 0.70 -3.3 4,339,058 + AO353_19735 0.70 -0.9 4,339,059 - -0.8 4,339,059 - AO353_19735 0.70 +1.0 4,339,109 + AO353_19735 0.76 -1.8 4,339,293 - -3.2 4,339,380 + -1.5 4,339,380 + +0.8 4,339,381 - +0.1 4,339,381 - -2.0 4,339,480 - -2.2 4,339,517 + AO353_19740 0.11 -1.2 4,339,517 + AO353_19740 0.11 +0.7 4,339,586 + AO353_19740 0.17 +0.2 4,339,587 - AO353_19740 0.17 +0.2 4,339,587 - AO353_19740 0.17 -1.3 4,339,734 + AO353_19740 0.30 -0.8 4,339,734 + AO353_19740 0.30 -0.6 4,339,735 - AO353_19740 0.30 +2.2 4,339,735 - AO353_19740 0.30 -0.3 4,339,735 - AO353_19740 0.30 +0.7 4,339,794 - AO353_19740 0.35 +0.3 4,339,809 - AO353_19740 0.37 +1.5 4,339,887 + AO353_19740 0.43 +0.1 4,339,962 - AO353_19740 0.50 -1.2 4,339,962 - AO353_19740 0.50 -0.0 4,340,168 - AO353_19740 0.68 -0.3
Or see this region's nucleotide sequence