Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11950

Experiment: methylglyoxal 0.009 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.009 vol%
2,633,269	+				-1.4
2,633,269	+				-1.9
2,633,269	+				-1.7
2,633,269	+				+0.1
2,633,269	+				-0.9
2,633,269	+				+1.6
2,633,269	+				-0.7
2,633,269	+				-1.6
2,633,270	-				+1.8
2,633,270	-				+1.0
2,633,270	-				+1.0
2,633,355	+				-0.7
2,633,355	+				+0.2
2,633,355	+				-0.6
2,633,355	+				-0.6
2,633,355	+				+4.9
2,633,355	+				+2.0
2,633,355	+				-0.7
2,633,355	+				+0.7
2,633,355	+				-1.2
2,633,355	+				-1.9
2,633,356	-				+0.1
2,633,356	-				-0.9
2,633,356	-				-1.2
2,633,356	-				-1.1
2,633,356	-				-1.5
2,633,356	-				-1.6
2,633,356	-				-1.7
2,633,356	-				-0.5
2,633,356	-				+1.2
2,633,356	-				+0.7
2,633,356	-				-1.7
2,633,356	-				-2.7
2,633,431	+				-0.6
2,633,431	+				+0.4
2,633,432	-				+0.6
2,633,447	+				-0.9
2,633,447	+				-0.8
2,633,448	-				-0.1
2,633,448	-				+1.7
2,633,509	+		AO353_11940	0.27	-0.2
2,633,509	+		AO353_11940	0.27	+1.0
2,633,509	+		AO353_11940	0.27	+0.7
2,633,509	+		AO353_11940	0.27	-0.6
2,633,509	+		AO353_11940	0.27	+1.3
2,633,528	-		AO353_11940	0.33	-1.7
2,633,538	-		AO353_11940	0.37	+1.3
2,633,737	+				+0.9
2,633,737	+				-0.2
2,633,738	-				-0.7
2,633,741	+				-0.5
2,633,741	+				+0.4
2,633,741	+				-0.8
2,633,741	+				-0.3
2,633,741	+				+0.8
2,633,742	-				+0.2
2,633,742	-				+1.4
2,633,742	-				+0.4
2,633,742	-				+0.1
2,633,742	-				-0.2
2,633,742	-				-0.6
2,633,742	-				-0.9
2,633,754	+				+2.0
2,633,754	+				-0.2
2,633,763	+				+0.6
2,633,763	+				-0.3
2,633,791	-				-0.6
2,633,883	+				+0.2
2,633,883	+				-1.9
2,633,889	+				-0.3
2,633,889	+				-0.1
2,633,889	+				+1.0
2,633,889	+				+1.2
2,633,889	+				+0.4
2,633,889	+				+0.0
2,633,889	+				+0.8
2,633,889	+				-0.6
2,633,890	-				-1.2
2,633,890	-				-0.6
2,633,890	-				+3.0
2,633,890	-				+3.2
2,633,890	-				-0.4
2,633,890	-				-0.6
2,633,890	-				+0.7
2,633,890	-				-0.6
2,633,914	-				+1.6
2,633,971	+				+1.1
2,633,971	+				-0.0
2,633,971	+				+0.7
2,633,971	+				-1.1
2,633,971	+				+1.7
2,633,972	-				-1.6
2,633,972	-				+0.2
2,633,972	-				+1.3
2,633,972	-				-1.4
2,634,045	+				-1.1
2,634,067	+		AO353_11945	0.18	-2.7
2,634,189	-		AO353_11945	0.74	-1.9
2,634,320	+		AO353_11950	0.12	-2.0
2,634,320	+		AO353_11950	0.12	-0.7
2,634,320	+		AO353_11950	0.12	-2.3
2,634,320	+		AO353_11950	0.12	-0.5
2,634,320	+		AO353_11950	0.12	-0.1
2,634,320	+		AO353_11950	0.12	-0.4
2,634,320	+		AO353_11950	0.12	-1.4
2,634,320	+		AO353_11950	0.12	-0.6
2,634,320	+		AO353_11950	0.12	-0.1
2,634,320	+		AO353_11950	0.12	-3.1
2,634,320	+		AO353_11950	0.12	-0.5
2,634,320	+		AO353_11950	0.12	-1.1
2,634,320	+		AO353_11950	0.12	+1.4
2,634,321	-		AO353_11950	0.12	+0.9
2,634,321	-		AO353_11950	0.12	-0.6
2,634,321	-		AO353_11950	0.12	-0.9
2,634,321	-		AO353_11950	0.12	-1.4
2,634,321	-		AO353_11950	0.12	+0.4
2,634,321	-		AO353_11950	0.12	+0.8
2,634,321	-		AO353_11950	0.12	+1.0
2,634,321	-		AO353_11950	0.12	-0.6
2,634,321	-		AO353_11950	0.12	-0.5
2,634,436	+		AO353_11950	0.30	-0.6
2,634,436	+		AO353_11950	0.30	-1.7
2,634,437	-		AO353_11950	0.30	-1.7
2,634,437	-		AO353_11950	0.30	+1.4
2,634,538	+		AO353_11950	0.45	+0.4
2,634,538	+		AO353_11950	0.45	+1.2
2,634,538	+		AO353_11950	0.45	+0.8
2,634,538	+		AO353_11950	0.45	+0.4
2,634,538	+		AO353_11950	0.45	-2.7
2,634,539	-		AO353_11950	0.45	+1.2
2,634,539	-		AO353_11950	0.45	-1.9
2,634,539	-		AO353_11950	0.45	-1.0
2,634,539	-		AO353_11950	0.45	-0.3
2,634,539	-		AO353_11950	0.45	-0.6
2,634,539	-		AO353_11950	0.45	-2.7
2,634,539	-		AO353_11950	0.45	-0.9
2,634,539	-		AO353_11950	0.45	-0.9
2,634,539	-		AO353_11950	0.45	-2.0
2,634,539	-		AO353_11950	0.45	+1.4
2,634,539	-		AO353_11950	0.45	+0.4
2,634,539	-		AO353_11950	0.45	-1.2
2,634,539	-		AO353_11950	0.45	-2.2
2,634,539	-		AO353_11950	0.45	-0.3
2,634,625	+		AO353_11950	0.58	+1.3
2,634,625	+		AO353_11950	0.58	+0.7
2,634,625	+		AO353_11950	0.58	+1.7
2,634,625	+		AO353_11950	0.58	-0.8
2,634,626	-		AO353_11950	0.59	+0.5
2,634,626	-		AO353_11950	0.59	+0.1
2,634,626	-		AO353_11950	0.59	-2.4
2,634,626	-		AO353_11950	0.59	+0.0
2,634,626	-		AO353_11950	0.59	+0.0
2,634,847	+				-3.8
2,634,847	+				+1.4
2,634,847	+				+0.6
2,634,847	+				-0.0
2,634,847	+				+0.2
2,634,848	-				-0.9
2,634,848	-				-0.6
2,634,848	-				+1.4
2,634,850	+				-1.2
2,634,850	+				+1.2
2,634,850	+				-0.3
2,634,851	-				+1.7
2,634,851	-				-2.6
2,634,851	-				-2.0
2,634,851	-				-1.4
2,634,851	-				-0.8
2,634,909	+				-1.0
2,634,910	-				-0.7
2,634,910	-				-2.5
2,634,910	-				+1.7
2,634,910	-				+2.2
2,634,910	-				-2.7
2,634,910	-				-1.8
2,634,920	+				+0.4
2,634,921	-				-2.0
2,634,921	-				+2.7
2,634,921	-				-2.2
2,634,921	-				-2.3
2,634,921	-				-0.2
2,634,921	-				-2.2
2,634,921	-				-2.5
2,634,927	+				+2.2
2,634,927	+				-0.3
2,634,965	+				-0.4
2,634,965	+				+0.0
2,634,965	+				+1.4
2,634,965	+				+1.7
2,634,965	+				+0.4
2,634,965	+				-0.8
2,634,966	-				+0.6
2,634,966	-				+0.4
2,634,966	-				-0.9
2,634,966	-				+1.0
2,634,966	-				-0.7
2,634,966	-				-0.2
2,634,968	+				-0.6
2,634,968	+				+1.2
2,635,213	-		AO353_11955	0.39	-1.6
2,635,213	-		AO353_11955	0.39	-2.4
2,635,213	-		AO353_11955	0.39	-2.0
2,635,214	+		AO353_11955	0.39	-0.2
2,635,227	+		AO353_11955	0.41	+2.0
2,635,227	+		AO353_11955	0.41	-0.6
2,635,227	+		AO353_11955	0.41	-0.3
2,635,228	-		AO353_11955	0.41	+1.4
2,635,228	-		AO353_11955	0.41	-0.7
2,635,228	-		AO353_11955	0.41	-0.9
2,635,228	-		AO353_11955	0.41	-2.3
2,635,228	-		AO353_11955	0.41	+0.4
2,635,266	+		AO353_11955	0.46	-0.6
2,635,266	+		AO353_11955	0.46	-0.6
2,635,266	+		AO353_11955	0.46	+1.3
2,635,266	+		AO353_11955	0.46	-3.0
2,635,266	+		AO353_11955	0.46	-1.4
2,635,266	+		AO353_11955	0.46	+0.4
2,635,266	+		AO353_11955	0.46	-0.9
2,635,267	-		AO353_11955	0.46	+0.4
2,635,267	-		AO353_11955	0.46	-1.2
2,635,267	-		AO353_11955	0.46	+0.8
2,635,267	-		AO353_11955	0.46	+0.7
2,635,267	-		AO353_11955	0.46	-2.3
2,635,267	-		AO353_11955	0.46	-1.6
2,635,267	-		AO353_11955	0.46	+0.1
2,635,267	-		AO353_11955	0.46	-0.5
2,635,431	+		AO353_11955	0.69	-0.2
2,635,432	-		AO353_11955	0.69	+1.2
2,635,578	+		AO353_11955	0.90	+0.7
2,635,578	+		AO353_11955	0.90	+1.4
2,635,579	-				-0.3
2,635,579	-				-1.9
2,635,579	-				-0.4
2,635,579	-				+1.0
2,635,579	-				+1.8
2,635,648	-				-1.8
2,635,648	-				-0.3
2,635,648	-				-1.7
2,635,648	-				+0.2
2,635,692	+				+0.1
2,635,692	+				+0.1
2,635,692	+				-1.7
2,635,692	+				-0.7
2,635,693	-				+0.3
2,635,713	+				-0.4
2,635,713	+				+0.9
2,635,714	-				+0.4
2,635,714	-				+0.4
2,635,714	-				-0.2
2,635,727	+				+0.1
2,635,727	+				-1.6
2,635,727	+				-1.3
2,635,728	-				-0.9
2,635,728	-				+1.6
2,635,757	-				-0.9
2,635,757	-				-2.2
2,635,776	+				-0.2
2,635,776	+				-0.7
2,635,776	+				-0.3
2,635,781	+				+0.2
2,635,781	+				-0.2
2,635,781	+				-2.5
2,635,781	+				+1.6
2,635,781	+				-0.7
2,635,782	-				-2.2
2,635,782	-				-2.3
2,635,782	-				+5.3
2,635,786	-				+1.4
2,635,842	+				-0.3
2,635,842	+				-1.9
2,635,842	+				-1.6
2,635,843	-				-0.3
2,635,843	-				+1.4
2,635,843	-				-1.3
2,635,843	-				+0.4
2,635,847	+				+0.4
2,635,847	+				-0.6
2,635,847	+				-1.4
2,635,847	+				+1.4
2,635,847	+				+1.4
2,635,847	+				+0.9
2,635,847	+				-0.2
2,635,847	+				-2.2
2,635,847	+				+2.4
2,635,847	+				-1.7
2,635,847	+				-1.4
2,635,847	+				+0.2
2,635,847	+				-1.9
2,635,847	+				+0.4
2,635,847	+				-1.7
2,635,847	+				-0.2
2,635,848	-				-0.1
2,635,848	-				+0.1
2,635,848	-				-0.6
2,635,848	-				-2.4
2,635,848	-				-1.4
2,635,848	-				+0.4
2,635,854	+				+0.7
2,635,854	+				+0.4
2,635,854	+				+1.0
2,635,854	+				-2.5
2,635,854	+				-2.0
2,635,854	+				-1.0
2,635,855	-				+0.1
2,635,855	-				+0.2
2,635,865	+				-1.7
2,635,865	+				+2.6
2,635,865	+				+0.1
2,635,865	+				-2.3
2,635,865	+				+0.6
2,635,865	+				+0.3
2,635,865	+				+1.6
2,635,865	+				+0.3
2,635,865	+				-0.7
2,635,865	+				+0.2
2,635,865	+				+1.2
2,635,865	+				+0.4
2,635,865	+				+1.9
2,635,865	+				+0.4
2,635,865	+				+0.2
2,635,865	+				-0.4
2,635,865	+				+0.4
2,635,866	-				-1.2
2,635,866	-				+0.6
2,635,866	-				+0.6
2,635,866	-				-1.2
2,635,866	-				-1.2
2,635,866	-				-2.2
2,635,866	-				+0.6
2,635,866	-				+1.6
2,635,866	-				+1.0
2,635,883	+				-1.6
2,635,883	+				-2.4
2,635,883	+				-0.8
2,635,883	+				-2.0
2,635,884	+				-0.4
2,635,884	-				-0.3
2,635,884	-				-0.2
2,635,884	-				-2.4
2,635,884	-				+0.7