Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1866
Experiment: MoYLS4 with Vanillin 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vanillin 5 mM |
---|---|---|---|---|---|
remove | |||||
2,290,136 | + | +0.2 | |||
2,290,349 | - | DvMF_1866 | 0.17 | -1.2 | |
2,290,548 | + | DvMF_1866 | 0.36 | -1.5 | |
2,290,572 | + | DvMF_1866 | 0.38 | -1.3 | |
2,290,697 | - | DvMF_1866 | 0.50 | -1.6 | |
2,290,884 | - | DvMF_1866 | 0.67 | -1.1 | |
2,291,130 | + | -1.6 | |||
2,291,138 | - | +0.2 | |||
2,291,149 | + | -4.1 | |||
2,291,369 | - | -2.0 | |||
2,291,369 | - | -0.4 | |||
2,291,537 | + | DvMF_1867 | 0.27 | -1.2 | |
2,291,544 | + | DvMF_1867 | 0.28 | -1.2 | |
2,291,563 | - | DvMF_1867 | 0.31 | +0.1 | |
2,291,950 | - | -0.6 | |||
2,292,084 | - | -0.5 | |||
2,292,213 | + | +0.4 | |||
2,292,221 | - | DvMF_1868 | 0.10 | -0.3 | |
2,292,221 | - | DvMF_1868 | 0.10 | -0.5 |
Or see this region's nucleotide sequence