Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0073
Experiment: MoYLS4 with Vanillin 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vanillin 5 mM |
---|---|---|---|---|---|
remove | |||||
92,729 | - | DvMF_0072 | 0.35 | +0.4 | |
92,736 | - | DvMF_0072 | 0.35 | -0.1 | |
92,955 | - | DvMF_0072 | 0.56 | +0.1 | |
93,078 | - | DvMF_0072 | 0.68 | +0.2 | |
93,490 | - | -0.3 | |||
93,604 | - | -0.3 | |||
93,622 | + | -0.8 | |||
93,630 | - | DvMF_0073 | 0.11 | -0.1 | |
93,768 | - | DvMF_0073 | 0.25 | -0.0 | |
93,803 | - | DvMF_0073 | 0.29 | -0.7 | |
94,045 | - | DvMF_0073 | 0.54 | -0.6 | |
94,050 | - | DvMF_0073 | 0.55 | -1.2 | |
94,128 | + | DvMF_0073 | 0.63 | -0.6 | |
94,293 | + | DvMF_0073 | 0.80 | -0.4 | |
94,337 | - | DvMF_0073 | 0.85 | -0.4 | |
94,347 | + | DvMF_0073 | 0.86 | -1.3 | |
94,351 | + | DvMF_0073 | 0.86 | -0.8 | |
94,361 | - | DvMF_0073 | 0.87 | -0.7 | |
94,386 | + | +0.0 | |||
94,394 | - | -0.5 | |||
94,394 | - | -0.3 | |||
94,476 | + | -0.4 | |||
94,495 | - | -0.4 | |||
94,500 | - | -0.2 | |||
94,506 | + | -0.2 |
Or see this region's nucleotide sequence