Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03050 and SMc03051 overlap by 4 nucleotides SMc03051 and SMc03052 overlap by 10 nucleotides SMc03052 and SMc03053 are separated by 6 nucleotides SMc03053 and SMc03054 are separated by 124 nucleotides
SMc03050: SMc03050 - flagellar biosynthesis regulatory protein FlaF, at 747,002 to 747,349
SMc03050
SMc03051: SMc03051 - flagellar biosynthesis repressor FlbT, at 747,346 to 747,795
SMc03051
SMc03052: SMc03052 - flagellar basal body rod modification protein, at 747,786 to 748,202
SMc03052
SMc03053: SMc03053 - flagellar biosynthesis protein FliQ, at 748,209 to 748,475
SMc03053
SMc03054: SMc03054 - flagellar biosynthesis protein FlhA, at 748,600 to 750,687
SMc03054
Position (kb) 748
749 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 747.318 kb on + strand at 747.318 kb on + strand at 747.318 kb on + strand at 747.318 kb on + strand at 747.319 kb on - strand at 747.319 kb on - strand at 747.363 kb on + strand at 747.363 kb on + strand at 747.364 kb on - strand at 747.364 kb on - strand at 747.396 kb on - strand, within SMc03051 at 747.517 kb on + strand, within SMc03051 at 747.518 kb on - strand, within SMc03051 at 747.726 kb on - strand, within SMc03051 at 747.767 kb on + strand at 747.822 kb on + strand at 747.823 kb on - strand at 747.823 kb on - strand at 747.882 kb on + strand, within SMc03052 at 747.883 kb on - strand, within SMc03052 at 748.126 kb on + strand, within SMc03052 at 748.127 kb on - strand, within SMc03052 at 748.129 kb on - strand, within SMc03052 at 748.192 kb on + strand at 748.237 kb on + strand, within SMc03053 at 748.238 kb on - strand, within SMc03053 at 748.460 kb on - strand at 748.474 kb on - strand at 748.502 kb on + strand at 748.503 kb on - strand at 748.503 kb on - strand at 748.529 kb on + strand at 748.530 kb on - strand at 748.530 kb on - strand at 748.530 kb on - strand at 748.530 kb on - strand at 748.560 kb on + strand at 748.561 kb on - strand at 749.032 kb on - strand, within SMc03054 at 749.273 kb on - strand, within SMc03054
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 747,318 + -2.0 747,318 + -0.5 747,318 + -0.8 747,318 + +0.8 747,319 - +0.8 747,319 - +4.8 747,363 + +0.1 747,363 + -3.3 747,364 - +0.3 747,364 - +1.1 747,396 - SMc03051 0.11 -0.4 747,517 + SMc03051 0.38 -1.8 747,518 - SMc03051 0.38 +0.4 747,726 - SMc03051 0.84 -1.2 747,767 + +1.4 747,822 + -0.6 747,823 - +0.8 747,823 - +0.2 747,882 + SMc03052 0.23 +0.5 747,883 - SMc03052 0.23 -3.4 748,126 + SMc03052 0.82 +1.9 748,127 - SMc03052 0.82 +0.4 748,129 - SMc03052 0.82 -2.0 748,192 + -0.3 748,237 + SMc03053 0.10 -2.4 748,238 - SMc03053 0.11 -0.4 748,460 - +0.1 748,474 - +2.3 748,502 + -0.0 748,503 - +0.3 748,503 - +0.2 748,529 + -0.3 748,530 - -0.5 748,530 - -0.3 748,530 - +0.5 748,530 - -0.5 748,560 + -1.3 748,561 - +0.9 749,032 - SMc03054 0.21 -3.7 749,273 - SMc03054 0.32 -1.6
Or see this region's nucleotide sequence