Strain Fitness in Sinorhizobium meliloti 1021 around SMc01833
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,657,460 | - | SMc01831 | 0.31 | +0.2 | |
2,657,713 | - | SMc01831 | 0.69 | +0.4 | |
2,657,882 | - | +0.8 | |||
2,657,906 | - | +0.2 | |||
2,657,930 | - | +0.4 | |||
2,657,930 | - | -0.4 | |||
2,658,148 | + | SMc01832 | 0.50 | +0.7 | |
2,658,496 | - | SMc01833 | 0.38 | +2.3 | |
2,658,566 | + | SMc01833 | 0.62 | -0.3 | |
2,658,567 | - | SMc01833 | 0.62 | +0.8 | |
2,658,659 | + | +1.3 | |||
2,658,659 | + | -2.7 | |||
2,658,660 | - | -1.1 | |||
2,658,660 | - | -0.2 | |||
2,658,660 | - | +0.2 | |||
2,658,671 | + | -4.2 | |||
2,658,671 | + | -0.6 | |||
2,658,672 | - | -1.2 | |||
2,658,766 | - | -1.4 | |||
2,658,957 | - | SMc01834 | 0.16 | +0.1 | |
2,658,957 | - | SMc01834 | 0.16 | -0.4 | |
2,659,010 | + | SMc01834 | 0.26 | +1.0 | |
2,659,172 | + | SMc01834 | 0.56 | +1.0 | |
2,659,173 | - | SMc01834 | 0.56 | -2.3 | |
2,659,173 | - | SMc01834 | 0.56 | -1.3 | |
2,659,235 | + | SMc01834 | 0.68 | -1.2 | |
2,659,302 | - | SMc01834 | 0.80 | +3.6 | |
2,659,314 | + | SMc01834 | 0.82 | +1.4 | |
2,659,315 | - | SMc01834 | 0.82 | -0.8 | |
2,659,381 | + | -2.6 | |||
2,659,382 | - | -2.2 | |||
2,659,419 | - | -2.8 | |||
2,659,619 | + | +0.7 | |||
2,659,620 | - | -1.5 |
Or see this region's nucleotide sequence