Strain Fitness in Sinorhizobium meliloti 1021 around SMc01519

Experiment: Polymyxin B sulfate 0.00005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.00005 mg/ml
2,611,683	-		SMc03949	0.89	+1.7
2,611,685	-				-0.3
2,611,685	-				-0.1
2,611,719	-				+0.8
2,611,811	+		SMc01521	0.25	+2.0
2,611,811	+		SMc01521	0.25	+0.8
2,611,812	-		SMc01521	0.25	-1.2
2,611,812	-		SMc01521	0.25	+1.8
2,611,845	-		SMc01521	0.34	-2.6
2,612,024	+		SMc01521	0.78	-2.0
2,612,024	+		SMc01521	0.78	+2.9
2,612,025	-		SMc01521	0.78	-1.8
2,612,025	-		SMc01521	0.78	-1.2
2,612,056	+				+1.8
2,612,057	-		SMc01521	0.86	+1.4
2,612,057	-		SMc01521	0.86	-3.0
2,612,086	+				-2.9
2,612,086	+				+1.9
2,612,087	-				+0.6
2,612,112	-				+0.5
2,612,139	+				-3.6
2,612,139	+				-2.3
2,612,269	-				+1.2
2,612,320	-		SMc01520	0.20	+1.3
2,612,320	-		SMc01520	0.20	+0.2
2,612,320	-		SMc01520	0.20	-3.1
2,612,320	-		SMc01520	0.20	+0.7
2,612,403	+		SMc01520	0.41	+2.4
2,612,404	-		SMc01520	0.41	+1.0
2,612,404	-		SMc01520	0.41	+0.1
2,612,442	+		SMc01520	0.51	-0.5
2,612,442	+		SMc01520	0.51	+0.3
2,612,442	+		SMc01520	0.51	+0.9
2,612,442	+		SMc01520	0.51	+1.0
2,612,442	+		SMc01520	0.51	-0.6
2,612,443	-		SMc01520	0.51	+1.2
2,612,616	-				+1.0
2,612,631	+				-0.6
2,612,631	+				-0.4
2,612,632	-				-2.3
2,612,632	-				-0.9
2,612,632	-				-0.2
2,612,880	+		SMc01519	0.64	+0.5
2,612,881	+		SMc01519	0.65	+1.4
2,612,881	+		SMc01519	0.65	+0.9
2,612,882	-		SMc01519	0.65	+0.8
2,612,882	-		SMc01519	0.65	-0.3
2,613,024	-				-0.7
2,613,054	+				+0.4
2,613,103	+				+1.0
2,613,103	+				-3.9
2,613,103	+				+0.8
2,613,103	+				-0.5
2,613,103	+				-0.6
2,613,104	-				-0.2
2,613,104	-				+0.5
2,613,135	+				+0.5
2,613,135	+				-0.2
2,613,136	-				+0.2
2,613,136	-				+0.8
2,613,144	+				-2.2
2,613,560	+		SMc01518	0.16	-0.4
2,613,560	+		SMc01518	0.16	+1.8
2,613,561	-		SMc01518	0.16	-0.6
2,613,561	-		SMc01518	0.16	+3.8
2,613,822	-				+1.3
2,613,822	-				-1.0
2,613,830	+				+0.8
2,613,831	-				+0.1
2,613,831	-				+0.5
2,613,839	+				+1.7
2,613,839	+				+1.6
2,613,892	-		SMc01517	0.20	-0.2
2,613,892	-		SMc01517	0.20	-0.7
2,613,892	-		SMc01517	0.20	+0.2