Strain Fitness in Sinorhizobium meliloti 1021 around SMc01458
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,303,294 | + | SMc01457 | 0.78 | +3.6 | |
2,303,295 | - | SMc01457 | 0.78 | -2.5 | |
2,303,295 | - | SMc01457 | 0.78 | -2.6 | |
2,303,295 | - | SMc01457 | 0.78 | -1.3 | |
2,303,295 | - | SMc01457 | 0.78 | -2.7 | |
2,304,185 | + | SMc01458 | 0.17 | -1.6 | |
2,304,186 | - | SMc01458 | 0.18 | +0.8 | |
2,304,523 | + | SMc01458 | 0.46 | -1.0 | |
2,304,531 | + | SMc01458 | 0.46 | -1.0 | |
2,304,531 | + | SMc01458 | 0.46 | -1.7 | |
2,304,531 | + | SMc01458 | 0.46 | -0.0 | |
2,304,531 | + | SMc01458 | 0.46 | +1.0 | |
2,304,531 | + | SMc01458 | 0.46 | +0.4 | |
2,304,532 | - | SMc01458 | 0.46 | -2.0 | |
2,304,532 | - | SMc01458 | 0.46 | -3.0 | |
2,304,533 | + | SMc01458 | 0.47 | +0.8 | |
2,304,533 | + | SMc01458 | 0.47 | +2.8 | |
2,304,534 | - | SMc01458 | 0.47 | -2.8 | |
2,304,863 | + | SMc01458 | 0.74 | -2.4 | |
2,305,303 | + | +0.0 | |||
2,305,397 | + | -3.4 | |||
2,305,398 | - | +2.4 | |||
2,305,591 | + | SMc01459 | 0.14 | +0.8 | |
2,306,105 | + | SMc01459 | 0.77 | +0.6 | |
2,306,105 | + | SMc01459 | 0.77 | +0.3 | |
2,306,106 | - | SMc01459 | 0.77 | -0.1 | |
2,306,151 | + | SMc01459 | 0.82 | +2.4 |
Or see this region's nucleotide sequence