Strain Fitness in Sinorhizobium meliloti 1021 around SMc01450
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,290,689 | + | SMc01449 | 0.14 | +0.3 | |
2,290,689 | + | SMc01449 | 0.14 | +0.8 | |
2,290,690 | - | SMc01449 | 0.14 | +1.7 | |
2,290,690 | - | SMc01449 | 0.14 | -0.7 | |
2,290,690 | - | SMc01449 | 0.14 | -0.1 | |
2,290,690 | - | SMc01449 | 0.14 | +0.5 | |
2,290,856 | - | SMc01449 | 0.68 | +1.8 | |
2,290,923 | + | SMc01449 | 0.90 | -0.3 | |
2,290,924 | - | +0.7 | |||
2,290,944 | + | -0.1 | |||
2,290,944 | + | -0.5 | |||
2,291,081 | - | -0.4 | |||
2,291,486 | + | +3.6 | |||
2,291,487 | - | +0.1 | |||
2,291,488 | + | -1.3 | |||
2,291,488 | + | -0.4 | |||
2,291,488 | + | +0.1 | |||
2,291,488 | + | -2.4 | |||
2,291,488 | + | -0.4 | |||
2,291,489 | - | +0.8 | |||
2,291,514 | + | -0.6 | |||
2,292,685 | + | SMc01452 | 0.76 | +0.8 | |
2,292,686 | - | SMc01452 | 0.76 | -0.4 | |
2,292,693 | + | SMc01452 | 0.79 | +1.2 | |
2,292,693 | + | SMc01452 | 0.79 | -1.3 | |
2,292,693 | + | SMc01452 | 0.79 | +4.8 | |
2,292,694 | - | SMc01452 | 0.79 | -1.6 | |
2,292,741 | + | -0.3 | |||
2,292,742 | - | +0.1 | |||
2,292,742 | - | +1.7 | |||
2,292,794 | - | +1.6 | |||
2,292,928 | - | +0.4 | |||
2,292,928 | - | -2.9 | |||
2,292,928 | - | -0.5 | |||
2,292,928 | - | +0.0 | |||
2,293,029 | + | +0.3 | |||
2,293,029 | + | -1.6 | |||
2,293,029 | + | -0.2 |
Or see this region's nucleotide sequence