Strain Fitness in Sinorhizobium meliloti 1021 around SMc01449
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,289,700 | - | SMc01447 | 0.50 | -3.6 | |
2,289,861 | - | +1.3 | |||
2,289,924 | + | +1.8 | |||
2,289,924 | + | +0.8 | |||
2,289,924 | + | +0.8 | |||
2,289,924 | + | -1.2 | |||
2,289,925 | - | +1.8 | |||
2,289,966 | - | +0.6 | |||
2,290,135 | + | SMc01448 | 0.11 | -1.9 | |
2,290,135 | + | SMc01448 | 0.11 | +0.6 | |
2,290,136 | - | SMc01448 | 0.11 | +1.1 | |
2,290,290 | - | SMc01448 | 0.46 | +0.8 | |
2,290,382 | - | SMc01448 | 0.66 | -0.8 | |
2,290,419 | + | SMc01448 | 0.75 | -0.7 | |
2,290,420 | - | SMc01448 | 0.75 | +1.4 | |
2,290,467 | + | SMc01448 | 0.85 | +0.4 | |
2,290,551 | - | -1.2 | |||
2,290,689 | + | SMc01449 | 0.14 | +0.3 | |
2,290,689 | + | SMc01449 | 0.14 | +0.8 | |
2,290,690 | - | SMc01449 | 0.14 | +1.7 | |
2,290,690 | - | SMc01449 | 0.14 | -0.7 | |
2,290,690 | - | SMc01449 | 0.14 | -0.1 | |
2,290,690 | - | SMc01449 | 0.14 | +0.5 | |
2,290,856 | - | SMc01449 | 0.68 | +1.8 | |
2,290,923 | + | SMc01449 | 0.90 | -0.3 | |
2,290,924 | - | +0.7 | |||
2,290,944 | + | -0.1 | |||
2,290,944 | + | -0.5 | |||
2,291,081 | - | -0.4 | |||
2,291,486 | + | +3.6 | |||
2,291,487 | - | +0.1 | |||
2,291,488 | + | -1.3 | |||
2,291,488 | + | -0.4 | |||
2,291,488 | + | +0.1 | |||
2,291,488 | + | -2.4 | |||
2,291,488 | + | -0.4 | |||
2,291,489 | - | +0.8 | |||
2,291,514 | + | -0.6 |
Or see this region's nucleotide sequence