Strain Fitness in Sinorhizobium meliloti 1021 around SMc00323

Experiment: Polymyxin B sulfate 0.00005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00322 and SMc00323 are separated by 238 nucleotidesSMc00323 and SMc00324 are separated by 367 nucleotides SMc00322: SMc00322 - hypothetical protein, at 274,729 to 276,447 SMc00322 SMc00323: SMc00323 - 30S ribosomal protein S15, at 276,686 to 276,955 SMc00323 SMc00324: SMc00324 - polynucleotide phosphorylase/polyadenylase, at 277,323 to 279,476 SMc00324 Position (kb) 276 277Strain fitness (log2 ratio) -1 0 1 2at 275.758 kb on + strand, within SMc00322at 275.759 kb on - strand, within SMc00322at 276.160 kb on - strand, within SMc00322at 276.160 kb on - strand, within SMc00322at 276.170 kb on + strand, within SMc00322at 276.399 kb on - strandat 277.039 kb on + strandat 277.039 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml
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275,758 + SMc00322 0.60 +0.0
275,759 - SMc00322 0.60 -0.4
276,160 - SMc00322 0.83 +0.5
276,160 - SMc00322 0.83 -0.3
276,170 + SMc00322 0.84 -0.7
276,399 - +0.3
277,039 + -0.8
277,039 + +2.0

Or see this region's nucleotide sequence