Strain Fitness in Sinorhizobium meliloti 1021 around SMc00020
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,010,610 | + | -3.0 | |||
1,010,610 | + | -3.6 | |||
1,011,316 | + | -3.6 | |||
1,011,328 | + | -1.8 | |||
1,011,329 | - | +1.0 | |||
1,011,573 | + | -0.6 | |||
1,011,573 | + | +1.6 | |||
1,011,573 | + | +2.2 | |||
1,011,573 | + | +0.1 | |||
1,011,574 | - | +1.9 | |||
1,011,574 | - | +1.6 | |||
1,011,738 | + | SMc00078 | 0.18 | -0.1 | |
1,011,738 | + | SMc00078 | 0.18 | -0.8 | |
1,011,738 | + | SMc00078 | 0.18 | -0.0 | |
1,011,840 | + | SMc00078 | 0.27 | +0.7 | |
1,011,841 | - | SMc00078 | 0.28 | +1.0 | |
1,011,973 | - | SMc00078 | 0.39 | +0.3 | |
1,011,984 | + | SMc00078 | 0.40 | +1.2 | |
1,012,062 | + | SMc00078 | 0.48 | -2.8 | |
1,012,062 | + | SMc00078 | 0.48 | -1.6 | |
1,012,063 | - | SMc00078 | 0.48 | +0.9 | |
1,012,063 | - | SMc00078 | 0.48 | +0.3 | |
1,012,063 | - | SMc00078 | 0.48 | -1.8 | |
1,012,128 | + | SMc00078 | 0.53 | -0.2 | |
1,012,185 | + | SMc00078 | 0.59 | -0.3 | |
1,012,185 | + | SMc00078 | 0.59 | -1.1 | |
1,012,298 | - | SMc00078 | 0.69 | -0.3 |
Or see this region's nucleotide sequence