Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1740 and SMa1741 overlap by 4 nucleotides SMa1741 and SMa1742 overlap by 1 nucleotides SMa1742 and SMa1745 overlap by 4 nucleotides
SMa1740: SMa1740 - Siderophore-interacting protein, at 983,996 to 985,066
SMa1740
SMa1741: SMa1741 - ABC transporter ATP-binding protein, at 985,063 to 985,905
SMa1741
SMa1742: SMa1742 - Fe3+-siderophore ABC transporter permease, at 985,905 to 986,942
SMa1742
SMa1745: SMa1745 - ABC transporter permease, Fe3+-siderophore transport system, at 986,939 to 988,039
SMa1745
Position (kb) 985
986
987 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 984.923 kb on + strand, within SMa1740 at 984.924 kb on - strand, within SMa1740 at 985.019 kb on - strand at 985.136 kb on - strand at 985.327 kb on - strand, within SMa1741 at 985.942 kb on + strand at 985.943 kb on - strand at 985.943 kb on - strand at 985.944 kb on + strand at 985.951 kb on + strand at 985.951 kb on + strand at 985.983 kb on + strand at 985.984 kb on - strand at 986.201 kb on + strand, within SMa1742 at 986.201 kb on + strand, within SMa1742 at 986.251 kb on - strand, within SMa1742 at 986.410 kb on + strand, within SMa1742 at 986.530 kb on - strand at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.574 kb on + strand, within SMa1742 at 986.575 kb on - strand, within SMa1742 at 986.575 kb on - strand, within SMa1742 at 986.649 kb on + strand, within SMa1742 at 986.689 kb on - strand, within SMa1742 at 986.776 kb on - strand, within SMa1742 at 986.776 kb on - strand, within SMa1742 at 987.014 kb on + strand at 987.015 kb on - strand at 987.015 kb on - strand at 987.015 kb on - strand at 987.150 kb on - strand, within SMa1745 at 987.332 kb on + strand, within SMa1745 at 987.333 kb on - strand, within SMa1745 at 987.409 kb on + strand, within SMa1745 at 987.588 kb on + strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.589 kb on - strand, within SMa1745 at 987.596 kb on + strand, within SMa1745 at 987.597 kb on - strand, within SMa1745 at 987.796 kb on + strand, within SMa1745
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 984,923 + SMa1740 0.87 -1.8 984,924 - SMa1740 0.87 +0.6 985,019 - -0.1 985,136 - -0.0 985,327 - SMa1741 0.31 -1.2 985,942 + +3.5 985,943 - +1.0 985,943 - +0.9 985,944 + -0.1 985,951 + -1.9 985,951 + +0.3 985,983 + -1.7 985,984 - -0.4 986,201 + SMa1742 0.29 +0.7 986,201 + SMa1742 0.29 +2.0 986,251 - SMa1742 0.33 +0.3 986,410 + SMa1742 0.49 -2.6 986,530 - +0.9 986,574 + SMa1742 0.64 +4.3 986,574 + SMa1742 0.64 -0.5 986,574 + SMa1742 0.64 +1.4 986,574 + SMa1742 0.64 -2.6 986,575 - SMa1742 0.65 +3.8 986,575 - SMa1742 0.65 +0.2 986,649 + SMa1742 0.72 +0.5 986,689 - SMa1742 0.76 -2.1 986,776 - SMa1742 0.84 -0.1 986,776 - SMa1742 0.84 -0.1 987,014 + -1.7 987,015 - +0.4 987,015 - -2.7 987,015 - +0.4 987,150 - SMa1745 0.19 -0.2 987,332 + SMa1745 0.36 +0.8 987,333 - SMa1745 0.36 +0.2 987,409 + SMa1745 0.43 +0.4 987,588 + SMa1745 0.59 +0.4 987,589 - SMa1745 0.59 +0.9 987,589 - SMa1745 0.59 +1.1 987,589 - SMa1745 0.59 -0.4 987,596 + SMa1745 0.60 -0.6 987,597 - SMa1745 0.60 -1.0 987,796 + SMa1745 0.78 +0.0
Or see this region's nucleotide sequence