Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0909 and SMa0911 are separated by 5 nucleotides SMa0911 and SMa0914 are separated by 327 nucleotides
SMa0909: SMa0909 - hypothetical protein, at 506,549 to 507,442
SMa0909
SMa0911: SMa0911 - hypothetical protein, at 507,448 to 508,479
SMa0911
SMa0914: SMa0914 - hypothetical protein, at 508,807 to 509,748
SMa0914
Position (kb) 507
508
509 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 506.992 kb on - strand, within SMa0909 at 506.992 kb on - strand, within SMa0909 at 507.511 kb on + strand at 507.511 kb on + strand at 507.511 kb on + strand at 507.542 kb on - strand at 507.542 kb on - strand at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.587 kb on - strand, within SMa0911 at 507.587 kb on - strand, within SMa0911 at 507.859 kb on + strand, within SMa0911 at 507.859 kb on + strand, within SMa0911 at 507.860 kb on - strand, within SMa0911 at 507.860 kb on - strand at 507.860 kb on - strand, within SMa0911 at 507.860 kb on - strand, within SMa0911 at 507.928 kb on + strand, within SMa0911 at 507.957 kb on + strand, within SMa0911 at 507.958 kb on - strand, within SMa0911 at 507.958 kb on - strand, within SMa0911 at 508.271 kb on - strand, within SMa0911 at 508.340 kb on + strand, within SMa0911 at 508.340 kb on + strand at 508.341 kb on - strand, within SMa0911 at 508.344 kb on + strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.349 kb on + strand, within SMa0911 at 508.349 kb on + strand, within SMa0911 at 508.514 kb on + strand at 508.588 kb on + strand at 508.589 kb on - strand at 508.594 kb on - strand at 508.594 kb on - strand at 508.702 kb on + strand at 508.815 kb on + strand at 508.879 kb on + strand at 508.895 kb on - strand at 509.310 kb on + strand, within SMa0914 at 509.310 kb on + strand, within SMa0914
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 506,992 - SMa0909 0.50 -0.6 506,992 - SMa0909 0.50 +0.7 507,511 + +0.1 507,511 + -0.2 507,511 + -0.5 507,542 - +0.9 507,542 - +0.0 507,586 + SMa0911 0.13 -0.4 507,586 + SMa0911 0.13 +1.0 507,586 + SMa0911 0.13 +1.8 507,586 + SMa0911 0.13 +0.2 507,587 - SMa0911 0.13 +0.7 507,587 - SMa0911 0.13 +1.5 507,859 + SMa0911 0.40 +0.8 507,859 + SMa0911 0.40 +1.3 507,860 - SMa0911 0.40 -0.8 507,860 - -0.2 507,860 - SMa0911 0.40 +0.0 507,860 - SMa0911 0.40 -1.2 507,928 + SMa0911 0.47 +1.1 507,957 + SMa0911 0.49 -2.7 507,958 - SMa0911 0.49 +0.3 507,958 - SMa0911 0.49 +0.2 508,271 - SMa0911 0.80 +0.8 508,340 + SMa0911 0.86 -0.4 508,340 + +2.8 508,341 - SMa0911 0.87 +0.0 508,344 + SMa0911 0.87 +0.6 508,345 - SMa0911 0.87 -0.7 508,345 - SMa0911 0.87 +0.4 508,345 - SMa0911 0.87 +0.8 508,349 + SMa0911 0.87 +3.2 508,349 + SMa0911 0.87 +3.6 508,514 + -0.9 508,588 + +0.8 508,589 - +0.5 508,594 - +1.9 508,594 - -2.6 508,702 + +1.4 508,815 + -2.2 508,879 + -0.4 508,895 - +0.6 509,310 + SMa0914 0.53 -1.4 509,310 + SMa0914 0.53 +0.4
Or see this region's nucleotide sequence