Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0851 and SMa0852 are separated by 688 nucleotides SMa0852 and SMa0853 are separated by 0 nucleotides SMa0853 and SMa0854 are separated by 493 nucleotides
SMa0851: SMa0851 - NodH sulfotransferase, at 468,199 to 468,942
SMa0851
SMa0852: SMa0852 - acyl carrier protein, at 469,631 to 469,912
SMa0852
SMa0853: SMa0853 - 3-ketoacyl-ACP synthase, at 469,913 to 471,121
SMa0853
SMa0854: SMa0854 - 3-ketoacyl-ACP reductase, at 471,615 to 472,352
SMa0854
Position (kb) 469
470
471
472 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 468.960 kb on + strand at 468.990 kb on - strand at 469.012 kb on - strand at 469.012 kb on - strand at 469.034 kb on + strand at 469.049 kb on + strand at 469.049 kb on + strand at 469.050 kb on - strand at 469.055 kb on + strand at 469.055 kb on + strand at 469.056 kb on - strand at 469.168 kb on - strand at 469.198 kb on - strand at 469.237 kb on + strand at 469.275 kb on + strand at 469.290 kb on + strand at 469.435 kb on + strand at 469.435 kb on + strand at 469.436 kb on - strand at 469.439 kb on + strand at 469.440 kb on - strand at 469.440 kb on - strand at 469.440 kb on - strand at 469.532 kb on + strand at 469.635 kb on + strand at 469.635 kb on + strand at 469.713 kb on + strand, within SMa0852 at 469.716 kb on + strand, within SMa0852 at 469.717 kb on - strand, within SMa0852 at 469.808 kb on + strand, within SMa0852 at 469.808 kb on + strand, within SMa0852 at 469.809 kb on - strand, within SMa0852 at 469.809 kb on - strand, within SMa0852 at 469.872 kb on + strand, within SMa0852 at 469.901 kb on - strand at 469.950 kb on + strand at 470.055 kb on + strand, within SMa0853 at 470.262 kb on - strand, within SMa0853 at 470.262 kb on - strand, within SMa0853 at 470.313 kb on + strand, within SMa0853 at 470.313 kb on + strand, within SMa0853 at 470.580 kb on + strand, within SMa0853 at 470.580 kb on + strand, within SMa0853 at 470.581 kb on - strand, within SMa0853 at 470.581 kb on - strand, within SMa0853 at 470.619 kb on - strand, within SMa0853 at 470.780 kb on + strand, within SMa0853 at 470.830 kb on + strand, within SMa0853 at 470.830 kb on + strand, within SMa0853 at 470.865 kb on - strand, within SMa0853 at 470.987 kb on + strand, within SMa0853 at 471.341 kb on - strand at 471.447 kb on + strand at 471.481 kb on + strand at 471.567 kb on + strand at 471.589 kb on - strand at 471.609 kb on - strand at 471.667 kb on + strand at 471.667 kb on + strand at 471.668 kb on - strand at 472.089 kb on - strand, within SMa0854
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 468,960 + -1.3 468,990 - -2.9 469,012 - -3.3 469,012 - +0.5 469,034 + -0.5 469,049 + +0.8 469,049 + -0.5 469,050 - -1.2 469,055 + -3.3 469,055 + -0.6 469,056 - +0.4 469,168 - +1.6 469,198 - -1.0 469,237 + -4.6 469,275 + +0.5 469,290 + +0.8 469,435 + -1.2 469,435 + -1.3 469,436 - -0.1 469,439 + +2.6 469,440 - +0.4 469,440 - -3.7 469,440 - -3.5 469,532 + -1.6 469,635 + +0.8 469,635 + -2.2 469,713 + SMa0852 0.29 +0.4 469,716 + SMa0852 0.30 -0.9 469,717 - SMa0852 0.30 -1.3 469,808 + SMa0852 0.63 -0.1 469,808 + SMa0852 0.63 -0.1 469,809 - SMa0852 0.63 +1.2 469,809 - SMa0852 0.63 +0.2 469,872 + SMa0852 0.85 +0.7 469,901 - +2.5 469,950 + -1.4 470,055 + SMa0853 0.12 -3.2 470,262 - SMa0853 0.29 +0.8 470,262 - SMa0853 0.29 -0.6 470,313 + SMa0853 0.33 +0.1 470,313 + SMa0853 0.33 +0.5 470,580 + SMa0853 0.55 -1.5 470,580 + SMa0853 0.55 +1.5 470,581 - SMa0853 0.55 -2.1 470,581 - SMa0853 0.55 +1.4 470,619 - SMa0853 0.58 +0.5 470,780 + SMa0853 0.72 +0.2 470,830 + SMa0853 0.76 -3.9 470,830 + SMa0853 0.76 -2.4 470,865 - SMa0853 0.79 -0.8 470,987 + SMa0853 0.89 -0.9 471,341 - +0.8 471,447 + +0.4 471,481 + -0.8 471,567 + -2.1 471,589 - -0.2 471,609 - +1.2 471,667 + +1.3 471,667 + -2.1 471,668 - +0.3 472,089 - SMa0854 0.64 -3.5
Or see this region's nucleotide sequence