Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21266 and SM_b21267 are separated by 58 nucleotides SM_b21267 and SM_b21268 are separated by 151 nucleotides SM_b21268 and SM_b21269 overlap by 53 nucleotides
SM_b21266: SM_b21266 - hypothetical protein, at 839,609 to 840,796
_b21266
SM_b21267: SM_b21267 - hypothetical protein, at 840,855 to 841,532
_b21267
SM_b21268: SM_b21268 - hypothetical protein, at 841,684 to 842,397
_b21268
SM_b21269: SM_b21269 - ABC transporter ATPase, at 842,345 to 844,435
_b21269
Position (kb) 841
842
843 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 840.775 kb on + strand at 840.775 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.891 kb on + strand at 840.892 kb on - strand at 840.892 kb on - strand at 840.892 kb on - strand at 840.892 kb on - strand at 841.338 kb on + strand, within SM_b21267 at 841.339 kb on - strand, within SM_b21267 at 841.459 kb on + strand, within SM_b21267 at 841.459 kb on + strand, within SM_b21267 at 841.460 kb on - strand at 841.526 kb on + strand at 841.526 kb on + strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.538 kb on + strand at 841.538 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.546 kb on - strand at 841.663 kb on + strand at 841.704 kb on + strand at 841.704 kb on + strand at 841.705 kb on - strand at 841.705 kb on - strand at 841.744 kb on + strand at 841.744 kb on + strand at 841.782 kb on - strand, within SM_b21268 at 841.813 kb on + strand, within SM_b21268 at 841.814 kb on - strand, within SM_b21268 at 842.041 kb on + strand, within SM_b21268 at 842.042 kb on - strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.050 kb on - strand, within SM_b21268 at 842.050 kb on - strand, within SM_b21268 at 842.053 kb on + strand, within SM_b21268 at 842.054 kb on - strand, within SM_b21268 at 842.054 kb on - strand, within SM_b21268 at 842.336 kb on - strand at 842.455 kb on + strand at 842.456 kb on - strand at 842.456 kb on - strand at 842.517 kb on - strand at 842.525 kb on + strand at 842.526 kb on - strand at 842.591 kb on + strand, within SM_b21269 at 842.592 kb on - strand, within SM_b21269 at 842.607 kb on - strand, within SM_b21269 at 842.663 kb on + strand, within SM_b21269 at 842.732 kb on - strand at 842.732 kb on - strand, within SM_b21269 at 842.735 kb on + strand, within SM_b21269 at 843.010 kb on - strand, within SM_b21269 at 843.022 kb on + strand, within SM_b21269 at 843.024 kb on + strand, within SM_b21269 at 843.024 kb on + strand, within SM_b21269 at 843.025 kb on - strand, within SM_b21269 at 843.025 kb on - strand, within SM_b21269 at 843.060 kb on + strand, within SM_b21269 at 843.061 kb on - strand, within SM_b21269 at 843.065 kb on + strand, within SM_b21269 at 843.251 kb on + strand, within SM_b21269
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 840,775 + -0.3 840,775 + -0.4 840,891 + +2.6 840,891 + +0.8 840,891 + +0.1 840,891 + -1.1 840,891 + +2.4 840,891 + -0.4 840,892 - +3.2 840,892 - -0.9 840,892 - -3.8 840,892 - +1.9 841,338 + SM_b21267 0.71 -0.8 841,339 - SM_b21267 0.71 -0.9 841,459 + SM_b21267 0.89 -1.1 841,459 + SM_b21267 0.89 +0.3 841,460 - -0.2 841,526 + +1.1 841,526 + +0.6 841,527 - -0.6 841,527 - +0.0 841,527 - +0.5 841,527 - -0.4 841,538 + -1.4 841,538 + -1.1 841,545 + -2.3 841,545 + -1.1 841,545 + -0.7 841,546 - +1.8 841,663 + -0.9 841,704 + -1.3 841,704 + -0.5 841,705 - +0.5 841,705 - +1.0 841,744 + +0.5 841,744 + -0.1 841,782 - SM_b21268 0.14 +1.7 841,813 + SM_b21268 0.18 +2.1 841,814 - SM_b21268 0.18 +0.3 842,041 + SM_b21268 0.50 +3.4 842,042 - SM_b21268 0.50 +2.4 842,043 + SM_b21268 0.50 +0.7 842,043 + SM_b21268 0.50 +1.4 842,043 + SM_b21268 0.50 +0.5 842,049 + SM_b21268 0.51 -0.5 842,049 + SM_b21268 0.51 +0.3 842,049 + SM_b21268 0.51 +0.9 842,050 - SM_b21268 0.51 +0.8 842,050 - SM_b21268 0.51 -2.7 842,053 + SM_b21268 0.52 +1.0 842,054 - SM_b21268 0.52 +0.8 842,054 - SM_b21268 0.52 +1.5 842,336 - +1.1 842,455 + +0.8 842,456 - +0.4 842,456 - +0.9 842,517 - -2.7 842,525 + +0.8 842,526 - +3.0 842,591 + SM_b21269 0.12 -0.6 842,592 - SM_b21269 0.12 +0.1 842,607 - SM_b21269 0.13 -4.4 842,663 + SM_b21269 0.15 -0.2 842,732 - +3.4 842,732 - SM_b21269 0.19 +0.8 842,735 + SM_b21269 0.19 -1.6 843,010 - SM_b21269 0.32 -3.2 843,022 + SM_b21269 0.32 +3.2 843,024 + SM_b21269 0.32 +1.7 843,024 + SM_b21269 0.32 +2.4 843,025 - SM_b21269 0.33 +1.3 843,025 - SM_b21269 0.33 +0.2 843,060 + SM_b21269 0.34 +1.3 843,061 - SM_b21269 0.34 +1.1 843,065 + SM_b21269 0.34 +0.6 843,251 + SM_b21269 0.43 -2.0
Or see this region's nucleotide sequence