Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21155 and SM_b21156 are separated by 1 nucleotides SM_b21156 and SM_b21157 are separated by 42 nucleotides SM_b21157 and SM_b21158 are separated by 20 nucleotides
SM_b21155: SM_b21155 - hypothetical protein, at 899,124 to 900,617
_b21155
SM_b21156: SM_b21156 - hypothetical protein, at 900,619 to 901,185
_b21156
SM_b21157: SM_b21157 - translation initiation inhibitor protein, at 901,228 to 901,617
_b21157
SM_b21158: SM_b21158 - transcriptional regulator, at 901,638 to 902,501
_b21158
Position (kb)
900
901
902 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 899.687 kb on + strand, within SM_b21155 at 899.697 kb on - strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.777 kb on - strand, within SM_b21155 at 900.006 kb on + strand, within SM_b21155 at 900.214 kb on - strand, within SM_b21155 at 900.358 kb on + strand, within SM_b21155 at 900.358 kb on + strand, within SM_b21155 at 900.359 kb on - strand, within SM_b21155 at 900.359 kb on - strand, within SM_b21155 at 900.537 kb on + strand at 900.537 kb on + strand at 900.538 kb on - strand at 900.546 kb on - strand at 900.695 kb on + strand, within SM_b21156 at 900.699 kb on - strand, within SM_b21156 at 900.897 kb on - strand, within SM_b21156 at 900.995 kb on - strand, within SM_b21156 at 901.054 kb on + strand, within SM_b21156 at 901.055 kb on - strand, within SM_b21156 at 901.430 kb on - strand, within SM_b21157 at 901.504 kb on + strand, within SM_b21157 at 901.505 kb on - strand, within SM_b21157 at 901.513 kb on + strand, within SM_b21157 at 901.513 kb on + strand, within SM_b21157 at 901.547 kb on + strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.597 kb on + strand at 901.598 kb on - strand at 901.598 kb on - strand at 901.644 kb on - strand at 901.861 kb on - strand, within SM_b21158 at 901.861 kb on - strand, within SM_b21158 at 901.982 kb on - strand, within SM_b21158 at 902.028 kb on + strand, within SM_b21158 at 902.028 kb on + strand, within SM_b21158 at 902.028 kb on + strand, within SM_b21158 at 902.029 kb on - strand, within SM_b21158 at 902.171 kb on + strand, within SM_b21158 at 902.171 kb on + strand, within SM_b21158
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 899,687 + SM_b21155 0.38 -1.2 899,697 - SM_b21155 0.38 +0.9 899,776 + SM_b21155 0.44 +1.3 899,776 + SM_b21155 0.44 -2.7 899,776 + SM_b21155 0.44 -2.8 899,777 - SM_b21155 0.44 +0.9 900,006 + SM_b21155 0.59 -0.4 900,214 - SM_b21155 0.73 +0.2 900,358 + SM_b21155 0.83 +0.1 900,358 + SM_b21155 0.83 +0.9 900,359 - SM_b21155 0.83 -0.4 900,359 - SM_b21155 0.83 -2.5 900,537 + +0.1 900,537 + -1.9 900,538 - +1.7 900,546 - +0.7 900,695 + SM_b21156 0.13 -1.7 900,699 - SM_b21156 0.14 +0.5 900,897 - SM_b21156 0.49 -0.4 900,995 - SM_b21156 0.66 +0.8 901,054 + SM_b21156 0.77 +1.6 901,055 - SM_b21156 0.77 +0.4 901,430 - SM_b21157 0.52 +2.4 901,504 + SM_b21157 0.71 -1.2 901,505 - SM_b21157 0.71 +0.3 901,513 + SM_b21157 0.73 -2.1 901,513 + SM_b21157 0.73 -0.2 901,547 + SM_b21157 0.82 -0.7 901,548 - SM_b21157 0.82 -0.2 901,548 - SM_b21157 0.82 +1.2 901,548 - SM_b21157 0.82 -0.7 901,597 + -0.2 901,598 - -0.1 901,598 - -0.9 901,644 - -0.6 901,861 - SM_b21158 0.26 +2.0 901,861 - SM_b21158 0.26 -2.4 901,982 - SM_b21158 0.40 +1.2 902,028 + SM_b21158 0.45 -2.7 902,028 + SM_b21158 0.45 +0.6 902,028 + SM_b21158 0.45 +0.9 902,029 - SM_b21158 0.45 +4.2 902,171 + SM_b21158 0.62 +0.3 902,171 + SM_b21158 0.62 -2.1
Or see this region's nucleotide sequence