Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20331 and SM_b20332 are separated by 691 nucleotides SM_b20332 and SM_b20333 are separated by 143 nucleotides
SM_b20331: SM_b20331 - hypothetical protein, at 334,596 to 334,952
_b20331
SM_b20332: SM_b20332 - hypothetical protein, at 335,644 to 336,585
_b20332
SM_b20333: SM_b20333 - transporter protein, at 336,729 to 338,849
_b20333
Position (kb) 335
336
337 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 335.004 kb on + strand at 335.004 kb on + strand at 335.004 kb on + strand at 335.043 kb on + strand at 335.136 kb on + strand at 335.147 kb on + strand at 335.148 kb on - strand at 335.148 kb on - strand at 335.154 kb on + strand at 335.154 kb on + strand at 335.154 kb on + strand at 335.154 kb on + strand at 335.155 kb on - strand at 335.155 kb on - strand at 335.155 kb on - strand at 335.158 kb on + strand at 335.159 kb on - strand at 335.159 kb on - strand at 335.236 kb on + strand at 335.327 kb on - strand at 335.395 kb on + strand at 335.396 kb on - strand at 335.396 kb on - strand at 335.423 kb on + strand at 335.423 kb on + strand at 335.424 kb on - strand at 335.566 kb on - strand at 335.566 kb on - strand at 335.747 kb on + strand, within SM_b20332 at 335.747 kb on + strand, within SM_b20332 at 335.795 kb on - strand, within SM_b20332 at 335.887 kb on + strand, within SM_b20332 at 335.888 kb on - strand, within SM_b20332 at 335.920 kb on + strand, within SM_b20332 at 335.920 kb on + strand, within SM_b20332 at 335.920 kb on + strand, within SM_b20332 at 335.921 kb on - strand, within SM_b20332 at 335.921 kb on - strand, within SM_b20332 at 335.921 kb on - strand, within SM_b20332 at 336.148 kb on + strand, within SM_b20332 at 336.202 kb on + strand, within SM_b20332 at 336.206 kb on - strand, within SM_b20332 at 336.206 kb on - strand, within SM_b20332 at 336.206 kb on - strand, within SM_b20332 at 336.469 kb on + strand, within SM_b20332 at 336.469 kb on + strand, within SM_b20332 at 336.470 kb on - strand, within SM_b20332 at 336.508 kb on + strand at 336.509 kb on - strand at 336.509 kb on - strand at 336.510 kb on + strand at 336.510 kb on + strand at 336.510 kb on + strand at 336.510 kb on + strand at 336.510 kb on + strand at 336.511 kb on - strand at 336.511 kb on - strand at 336.618 kb on + strand at 336.618 kb on + strand at 336.654 kb on - strand at 336.665 kb on - strand at 336.671 kb on - strand at 336.691 kb on + strand at 336.730 kb on + strand at 336.730 kb on + strand at 336.731 kb on - strand at 336.777 kb on + strand at 336.790 kb on + strand at 336.919 kb on - strand at 336.964 kb on + strand, within SM_b20333 at 336.965 kb on - strand, within SM_b20333 at 337.473 kb on + strand, within SM_b20333 at 337.473 kb on + strand, within SM_b20333 at 337.473 kb on + strand, within SM_b20333 at 337.526 kb on - strand, within SM_b20333
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 335,004 + +2.9 335,004 + +0.0 335,004 + +1.1 335,043 + -1.1 335,136 + -0.4 335,147 + +2.1 335,148 - +0.2 335,148 - +0.9 335,154 + -0.4 335,154 + -1.1 335,154 + +0.9 335,154 + +1.1 335,155 - +0.3 335,155 - +0.1 335,155 - +0.8 335,158 + -1.3 335,159 - -2.1 335,159 - +1.9 335,236 + -0.3 335,327 - +0.4 335,395 + +0.6 335,396 - -0.2 335,396 - +0.0 335,423 + +1.1 335,423 + -2.1 335,424 - +2.5 335,566 - -0.5 335,566 - -1.5 335,747 + SM_b20332 0.11 -1.6 335,747 + SM_b20332 0.11 -1.4 335,795 - SM_b20332 0.16 -2.3 335,887 + SM_b20332 0.26 -3.8 335,888 - SM_b20332 0.26 -1.2 335,920 + SM_b20332 0.29 +0.5 335,920 + SM_b20332 0.29 -2.2 335,920 + SM_b20332 0.29 -0.1 335,921 - SM_b20332 0.29 -2.2 335,921 - SM_b20332 0.29 -2.2 335,921 - SM_b20332 0.29 -0.8 336,148 + SM_b20332 0.54 -0.5 336,202 + SM_b20332 0.59 -0.4 336,206 - SM_b20332 0.60 -0.6 336,206 - SM_b20332 0.60 +0.9 336,206 - SM_b20332 0.60 +0.8 336,469 + SM_b20332 0.88 +0.9 336,469 + SM_b20332 0.88 -0.6 336,470 - SM_b20332 0.88 -2.8 336,508 + -3.1 336,509 - -1.0 336,509 - +0.4 336,510 + +0.1 336,510 + +0.6 336,510 + -2.2 336,510 + -0.9 336,510 + +3.1 336,511 - -1.6 336,511 - +2.5 336,618 + -0.8 336,618 + +0.8 336,654 - +1.9 336,665 - +0.4 336,671 - -1.8 336,691 + +0.9 336,730 + +1.6 336,730 + +2.7 336,731 - +0.9 336,777 + +0.3 336,790 + +1.4 336,919 - -0.6 336,964 + SM_b20333 0.11 +2.1 336,965 - SM_b20333 0.11 -1.0 337,473 + SM_b20333 0.35 +0.9 337,473 + SM_b20333 0.35 +0.1 337,473 + SM_b20333 0.35 +0.4 337,526 - SM_b20333 0.38 +0.9
Or see this region's nucleotide sequence