Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20246 and SM_b20247 are separated by 4 nucleotides SM_b20247 and SM_b20248 are separated by 29 nucleotides
SM_b20246: SM_b20246 - oxidoreductase, at 251,298 to 252,290
_b20246
SM_b20247: SM_b20247 - oxidoreductase, at 252,295 to 253,308
_b20247
SM_b20248: SM_b20248 - hypothetical protein, at 253,338 to 255,086
_b20248
Position (kb) 252
253
254 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 251.312 kb on - strand at 251.312 kb on - strand at 251.371 kb on + strand at 251.452 kb on + strand, within SM_b20246 at 251.592 kb on + strand, within SM_b20246 at 251.593 kb on - strand, within SM_b20246 at 251.601 kb on + strand, within SM_b20246 at 251.602 kb on - strand, within SM_b20246 at 251.813 kb on - strand, within SM_b20246 at 252.236 kb on + strand at 252.697 kb on + strand, within SM_b20247 at 252.698 kb on - strand, within SM_b20247 at 252.787 kb on + strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.973 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.076 kb on - strand, within SM_b20247 at 253.101 kb on + strand, within SM_b20247 at 253.121 kb on - strand, within SM_b20247 at 253.297 kb on + strand at 253.307 kb on - strand at 253.340 kb on - strand at 253.340 kb on - strand at 253.375 kb on + strand at 253.465 kb on + strand at 253.891 kb on + strand, within SM_b20248 at 254.179 kb on - strand, within SM_b20248
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.00005 mg/ml remove 251,312 - +0.8 251,312 - +0.1 251,371 + -1.4 251,452 + SM_b20246 0.16 +4.9 251,592 + SM_b20246 0.30 +0.4 251,593 - SM_b20246 0.30 -0.0 251,601 + SM_b20246 0.31 +0.7 251,602 - SM_b20246 0.31 -3.0 251,813 - SM_b20246 0.52 +1.7 252,236 + +1.0 252,697 + SM_b20247 0.40 +1.0 252,698 - SM_b20247 0.40 -1.5 252,787 + SM_b20247 0.49 +0.6 252,879 - SM_b20247 0.58 +0.5 252,879 - SM_b20247 0.58 -0.9 252,879 - SM_b20247 0.58 -0.0 252,973 + SM_b20247 0.67 -0.5 253,075 + SM_b20247 0.77 +2.1 253,075 + SM_b20247 0.77 +0.3 253,076 - SM_b20247 0.77 -0.9 253,101 + SM_b20247 0.79 -1.9 253,121 - SM_b20247 0.81 +0.4 253,297 + -1.6 253,307 - +0.5 253,340 - +3.3 253,340 - +1.8 253,375 + +4.4 253,465 + -3.3 253,891 + SM_b20248 0.32 +0.4 254,179 - SM_b20248 0.48 -0.5
Or see this region's nucleotide sequence