Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20010
Experiment: Polymyxin B sulfate 0.00005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 0.00005 mg/ml |
---|---|---|---|---|---|
remove | |||||
13,399 | - | +0.5 | |||
13,551 | + | SM_b20009 | 0.22 | +1.0 | |
13,551 | + | SM_b20009 | 0.22 | -3.2 | |
13,552 | - | SM_b20009 | 0.22 | -0.2 | |
13,561 | + | SM_b20009 | 0.23 | +1.9 | |
13,846 | + | SM_b20009 | 0.53 | +0.7 | |
13,847 | - | SM_b20009 | 0.53 | -3.1 | |
13,847 | - | SM_b20009 | 0.53 | -0.0 | |
13,973 | + | SM_b20009 | 0.67 | +0.2 | |
14,229 | + | -0.1 | |||
14,230 | - | -0.6 | |||
14,230 | - | +0.0 | |||
14,263 | + | +0.6 | |||
14,264 | - | -2.7 | |||
14,264 | - | -1.2 | |||
14,340 | + | -1.7 | |||
14,369 | - | -0.1 | |||
14,655 | - | SM_b20010 | 0.26 | +0.8 | |
14,676 | - | SM_b20010 | 0.28 | +0.0 | |
14,734 | + | SM_b20010 | 0.34 | -0.4 | |
14,735 | - | SM_b20010 | 0.34 | +1.0 | |
15,441 | - | -0.2 | |||
15,470 | + | -2.0 | |||
15,470 | + | +0.2 | |||
15,470 | + | +1.1 | |||
15,675 | - | +3.0 | |||
15,906 | + | SM_b20011 | 0.30 | +0.1 | |
15,907 | - | SM_b20011 | 0.31 | -2.2 | |
15,907 | - | SM_b20011 | 0.31 | -3.0 | |
15,908 | + | SM_b20011 | 0.31 | -3.9 | |
15,908 | + | SM_b20011 | 0.31 | +1.3 | |
15,909 | - | SM_b20011 | 0.31 | +4.7 | |
16,301 | + | SM_b20011 | 0.81 | +0.5 |
Or see this region's nucleotide sequence