Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4329
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,789,268 | - | Pf1N1B4_4328 | 0.41 | +0.6 | |
4,789,351 | + | Pf1N1B4_4328 | 0.48 | +0.6 | |
4,789,755 | - | Pf1N1B4_4328 | 0.84 | +0.7 | |
4,789,810 | + | Pf1N1B4_4328 | 0.89 | -0.1 | |
4,789,811 | - | Pf1N1B4_4328 | 0.89 | -0.4 | |
4,789,860 | + | +0.5 | |||
4,789,861 | - | +1.1 | |||
4,790,121 | - | -1.2 | |||
4,790,210 | - | +0.9 | |||
4,790,527 | + | Pf1N1B4_4329 | 0.66 | -0.0 | |
4,790,575 | - | Pf1N1B4_4329 | 0.76 | -1.4 | |
4,790,605 | + | Pf1N1B4_4329 | 0.83 | -1.4 | |
4,790,641 | + | +0.3 | |||
4,790,641 | + | -1.4 | |||
4,790,641 | + | -1.4 | |||
4,790,641 | + | +0.2 | |||
4,790,867 | + | Pf1N1B4_4330 | 0.19 | +1.2 | |
4,790,909 | - | Pf1N1B4_4330 | 0.23 | +1.2 | |
4,791,423 | + | Pf1N1B4_4330 | 0.84 | -0.3 | |
4,791,423 | + | Pf1N1B4_4330 | 0.84 | +0.4 | |
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -1.4 | |
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -0.1 | |
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -0.0 | |
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -2.7 | |
4,791,424 | - | +1.2 | |||
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -1.4 | |
4,791,424 | - | Pf1N1B4_4330 | 0.85 | -0.2 | |
4,791,554 | + | +1.2 | |||
4,791,575 | + | +1.2 | |||
4,791,575 | + | -0.0 |
Or see this region's nucleotide sequence